SRR1781370_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781370_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	584997
Sequences flagged as poor quality	0
Sequence length	76
%GC	96

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	471986	80.681781274092	No Hit
CTTATACACATCTGACGCTGCCGACGACATTCGATGTGTAGATCTCGGTG	4107	0.70205488233273	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1072	0.18324880298531446	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	842	0.1439323620463011	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	748	0.1278639035755739	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	717	0.12256473110118513	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	587	0.10034239491826452	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGAGCT	20	7.906623E-5	70.03346	39
GTAGAGC	20	7.906623E-5	70.03346	38
AGGGGTC	20	7.906623E-5	70.03346	40
TGTAGAG	30	1.0200165E-7	70.03346	37
CCACACG	15	0.0022201438	70.03346	36
TGTAGCC	15	0.0022208975	70.027466	34
AAGTGTA	25	2.8326358E-6	70.027466	34
CTGTGTA	35	3.6980055E-9	70.027466	34
TGTCATT	15	0.0022216511	70.02148	58
CCGATAA	15	0.0022216511	70.02148	53
GCAGTGA	25	2.8340764E-6	70.02148	60
ATTAAAT	15	0.0022216511	70.02148	62
GGTCAGT	15	0.0022216511	70.02148	58
TGTGATG	15	0.0022216511	70.02148	58
GTGTGAT	20	7.9133286E-5	70.02148	57
CAGTGAA	20	7.9133286E-5	70.02148	61
CAGTAAA	35	3.6998244E-9	70.02148	61
CGGTAGA	15	0.0022216511	70.02148	61
GCGTATG	15	0.0022216511	70.02148	55
TCGGTAA	15	0.0022216511	70.02148	60