SRR1781369_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781369_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	583350
Sequences flagged as poor quality	0
Sequence length	76
%GC	95

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	465559	79.80783406188394	No Hit
CTTATACACATCTGACGCTGCCGACGACATTCGATGTGTAGATCTCGGTG	4481	0.7681494814433873	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1377	0.23605039856004115	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	933	0.15993828747750063	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	835	0.14313876746378673	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	800	0.13713893888746034	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	740	0.12685351847090084	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	692	0.1186251821376532	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	624	0.10696837233221909	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAACTCG	20	7.8973375E-5	70.05005	41
TAGAGCT	25	2.8272098E-6	70.05004	39
CAAGTGT	15	0.0022180567	70.05004	41
ACGTTTT	15	0.0022180567	70.05004	37
TTATGCC	15	0.0022180567	70.05004	37
CTAAGGC	15	0.0022180567	70.05004	43
CCTAAGG	15	0.0022180567	70.05004	42
TATGCCT	15	0.0022180567	70.05004	38
GCCTAAG	15	0.0022180567	70.05004	41
TAGATCG	15	0.0022180567	70.05004	39
ATTATGC	15	0.002218812	70.04403	36
CCTCCTA	15	0.0022195673	70.03802	35
TAAGGCC	15	0.0022195673	70.03802	44
GCAGCAC	15	0.0022195673	70.03802	46
AAATCTC	15	0.0022210788	70.026	34
CAGCACG	15	0.0022210788	70.026	47
CCGTGTA	15	0.0022210788	70.026	34
TCACGAC	15	0.0022218348	70.01999	50
GTCATTT	15	0.0022218348	70.01999	55
CGTTGGT	15	0.0022218348	70.01999	52