SRR1781368_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781368_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	536097
Sequences flagged as poor quality	0
Sequence length	76
%GC	95

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	432632	80.7003210239938	No Hit
CTTATACACATCTGACGCTGCCGACGACATTCGATGTGTAGATCTCGGTG	4050	0.7554602991622784	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	991	0.18485460653575753	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	833	0.15538232819806863	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	640	0.11938138060836007	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	635	0.11844871357235724	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	633	0.11807564675795612	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	596	0.11117391069153529	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	547	0.10203377373870773	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGGAT	20	7.8956335E-5	70.05205	37
CTTATTT	15	0.0022177063	70.05205	37
TTCTCTG	15	0.0022177063	70.05205	42
GTTTCTT	15	0.0022185284	70.0455	35
TCTTATT	15	0.0022185284	70.0455	36
CATGCCC	15	0.0022193505	70.038956	55
CCGTGTC	30	1.0193071E-7	70.038956	55
TCAGGGG	20	7.902946E-5	70.038956	60
TACTGTT	15	0.0022193505	70.038956	34
GGGGTCA	25	2.8295526E-6	70.038956	56
GGTATCA	15	0.0022193505	70.038956	56
CAGGAAA	30	1.0193071E-7	70.038956	61
CGGGAGA	20	7.902946E-5	70.038956	61
CAGTGAA	15	0.0022193505	70.038956	61
CAGTAAG	15	0.0022193505	70.038956	61
GTCAGTA	15	0.0022201731	70.03242	59
TAGCAGG	30	1.0199619E-7	70.03242	58
GTGTCAG	20	7.9066034E-5	70.03242	57
GGGCAGT	40	1.3460522E-10	70.03242	58
GCTACGT	15	0.0022201731	70.03242	67