SRR1781358_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781358_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	646571
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	156407	24.190228141998325	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTAAC	25	2.3952038E-4	55.976547	12
CGCACCT	25	2.3961194E-4	55.972218	8
AGCGCAT	20	0.0069387923	52.5227	45
TGCCGGA	20	0.0069409166	52.51864	47
GCCGGAT	20	0.006943042	52.514572	54
AGAACGT	20	0.0069494196	52.50238	62
CGGCACA	20	0.0069600595	52.482075	14
CGACGAG	40	7.5008575E-7	52.478016	22
CATCGTT	30	5.862732E-4	46.69046	42
CGCGGGT	30	5.891876E-4	46.64352	7
TGCCGGC	130	0.0	45.7536	19
GGTCTCG	55	1.3061799E-7	44.56817	41
GTCCGCA	40	4.5913326E-5	43.751984	32
GACGCAC	40	4.606034E-5	43.7283	6
CTGGCGC	205	0.0	40.95845	12
ACGGTGA	35	0.001257471	39.98634	15
CTACGGT	35	0.0012579495	39.98325	13
TGGCGCT	255	0.0	39.787254	13
TTGTGCG	45	9.203358E-5	38.884632	2
GCCGGCG	225	0.0	38.87561	20