SRR1781350_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781350_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	653304
Sequences flagged as poor quality	0
Sequence length	76
%GC	94

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	501074	76.69844360359036	No Hit
CTTATACACATCTGACGCTGCCGACGAAGATCTCTGTGTAGATCTCGGTG	4779	0.731512435252195	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1798	0.275216438289066	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1128	0.17266081334263989	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1113	0.1703647918886154	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1001	0.1532211650318994	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	890	0.13623060627211836	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	864	0.13225083575180926	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	764	0.11694402605831283	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCCGTC	15	0.0022183885	70.048355	39
TAGATGT	35	3.6907295E-9	70.048355	39
TCCCCGT	15	0.0022183885	70.048355	38
TCGTTTA	15	0.0022210868	70.02689	54
GAGACAA	15	0.0022210868	70.02689	54
GATTCGT	15	0.0022210868	70.02689	51
TTGATTC	15	0.0022217617	70.02152	49
TGATTCG	15	0.0022217617	70.02152	50
CATGTCT	15	0.0022217617	70.02152	56
CCTACGT	20	7.916997E-5	70.01616	57
GTTATGC	45	5.456968E-12	70.00544	1
TCGGGAA	20	7.923007E-5	70.00543	60
TTCTTCC	15	0.002224463	70.00008	64
CATGGGT	15	0.002225139	69.99472	32
GAACTCT	15	0.0022258149	69.98936	29
CGTACCT	15	0.0022258149	69.98936	29
TTATGCA	55	0.0	69.984	2
TTCTAGG	15	0.002227167	69.97864	28
CAACCCT	15	0.0022278433	69.97328	16
CCATCCC	15	0.0022278433	69.97328	17