SRR1781345_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781345_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	577647
Sequences flagged as poor quality	0
Sequence length	76
%GC	96

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	467137	80.86893898869032	No Hit
CTTATACACATCTGACGCTGCCGACGAAGATCTCTGTGTAGATCTCGGTG	4613	0.7985846027071897	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1317	0.22799391323766938	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1013	0.1753666166361117	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	875	0.15147659383672035	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	840	0.14541753008325153	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	788	0.1364154925066693	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	654	0.11321793413624584	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	644	0.11148677306382618	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTGT	15	0.0022209706	70.02677	46
CAGCAAA	15	0.0022209706	70.02677	38
AAAACGT	15	0.0022209706	70.02677	43
GTGGATC	25	2.8327595E-6	70.02677	38
AAACGTT	15	0.0022209706	70.02677	44
ATCCGCG	15	0.0022209706	70.02677	38
ATTCCAT	20	7.910283E-5	70.02677	36
TTCCATC	20	7.910283E-5	70.02677	37
TTGCGAC	15	0.0022209706	70.02677	40
TTTGCGA	15	0.0022209706	70.02677	39
CGATGGA	15	0.0022209706	70.02677	46
GCGCTTT	15	0.0022209706	70.02677	35
CGCTTTG	15	0.0022209706	70.02677	36
GGTAGAT	20	7.910283E-5	70.02677	37
CCCCGTT	15	0.002221734	70.020706	47
TGGAGTC	15	0.0022224977	70.01464	55
CGGCGTA	35	3.7034624E-9	70.01464	53
GTCGCAG	15	0.0022224977	70.01464	51
CCAGGGG	15	0.0022224977	70.01464	33
GGGTATC	20	7.917075E-5	70.01464	55