SRR1781335_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781335_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	677086
Sequences flagged as poor quality	0
Sequence length	76
%GC	78

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	364672	53.85903710902308	No Hit
CTTATACACATCTGACGCTGCCGACGATTCTAAGTGTGTAGATCTCGGTG	4584	0.6770188720487501	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1093	0.1614270565334389	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	797	0.11771030563325782	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATAC	20	7.916905E-5	70.0167	1
GTTTCGC	15	0.0022237073	70.006355	49
GACCGAT	15	0.0022269676	69.9805	18
TACGGAG	15	0.0022269676	69.9805	7
TCAACGT	15	0.0022269676	69.9805	14
TATACCG	15	0.00222762	69.97533	2
TTCGGGA	30	8.364546E-6	58.34725	36
CGCGTCT	100	0.0	55.9844	7
CGTATCA	925	0.0	54.49949	56
GTGGTCG	1015	0.0	54.146847	48
TGCCGGC	305	0.0	53.9194	19
TCGCCGT	950	0.0	53.802307	52
GCCGTAT	920	0.0	53.273575	54
CCGTATC	915	0.0	53.182087	55
GGTCGCC	1025	0.0	52.590137	50
CGGTGGT	1120	0.0	52.512527	46
GATCTCG	960	0.0	52.512527	41
TGAATCG	20	0.006944254	52.512527	57
AATCGGT	20	0.006946284	52.508644	61
ACGAAGG	20	0.0069584725	52.48537	24