SRR1781325_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781325_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	484498
Sequences flagged as poor quality	0
Sequence length	76
%GC	85

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	301006	62.127397842715546	No Hit
CTTATACACATCTGACGCTGCCGACGACCCTATCGGTGTAGATCTCGGTG	1554	0.3207443580778455	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	813	0.16780255026852536	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	648	0.13374668213284677	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	537	0.11083637084157211	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	519	0.1071211852267708	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	500	0.10319960041114722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACGTT	15	0.0022201966	70.031204	53
GCGGAGT	15	0.0022201966	70.031204	52
GCGTAGC	15	0.0022201966	70.031204	55
GGCACTT	15	0.0022247494	69.99505	1
TTCGATG	15	0.0022247494	69.99505	30
TACGCGG	20	7.9430014E-5	69.96615	5
GGTACGC	25	2.8484246E-6	69.95892	3
ACGTCTG	55	0.0	63.605583	8
CGGGAGA	40	1.0633812E-8	61.26464	61
CGTCTGA	35	2.982306E-7	59.970978	9
ACGCGTC	70	0.0	59.970978	6
GTACGCG	65	0.0	59.196014	4
CAGGCGT	25	2.3856116E-4	56.019176	47
GTTCACG	25	2.3856116E-4	56.019176	34
TCGATGT	25	2.3892673E-4	56.00182	31
CCTGTTG	25	2.3953701E-4	55.97291	25
ATTGAAC	25	2.3953701E-4	55.97291	25
CGTCTGG	170	0.0	55.56135	9
CCGTATC	295	0.0	54.600597	55
CGCGTCT	135	0.0	54.418114	7