SRR1781314_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781314_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	220105
Sequences flagged as poor quality	0
Sequence length	76
%GC	72

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	65483	29.7508007541855	No Hit
CTTATACACATCTGACGCTGCCGACGAATCTGGCGGTGTAGATCTCGGTG	1997	0.9072942459280798	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	792	0.3598282637831944	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	459	0.20853683469253312	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	369	0.16764725926262464	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	314	0.14265918538879171	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATAAC	15	0.0022225087	70.0	17
AGCGTAG	15	0.0022225087	70.0	5
TAGATGA	15	0.0022225087	70.0	5
CGTATCA	305	0.0	55.081966	56
GCCGTAT	300	0.0	54.833332	54
AGATCTC	355	0.0	54.225353	40
TAGATCT	355	0.0	54.225353	39
CATTAAA	330	0.0	54.090908	61
CCGTATC	300	0.0	53.666668	55
ATCATTA	330	0.0	53.030304	59
GTTTATG	20	0.006944609	52.5	38
GTCAGTC	20	0.006944609	52.5	46
TTGACGA	20	0.006944609	52.5	20
TAGGGTA	20	0.006944609	52.5	5
CAGTACT	20	0.006944609	52.5	25
ATCTCGG	375	0.0	52.26667	42
GTATCAT	325	0.0	51.692307	57
TCTCGGT	360	0.0	51.527775	43
GTAGATC	395	0.0	50.506325	38
TCATTAA	365	0.0	49.863014	60