SRR1781312_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781312_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	167294
Sequences flagged as poor quality	0
Sequence length	76
%GC	75

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	54450	32.54749124296149	No Hit
CTTATACACATCTGACGCTGCCGACGAATCTGGCGGTGTAGATCTCGGTG	1347	0.8051693425944744	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	740	0.44233505086853087	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	507	0.30305928485181777	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	327	0.19546427247839135	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	271	0.16199026862888088	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	193	0.11536576326706277	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	181	0.10819276244216768	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	176	0.1052040120984614	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACATGA	15	0.0022218362	69.9979	47
TTGTGCG	35	2.9550029E-7	60.016148	2
GCCGTAT	285	0.0	58.94561	54
GTCCGCA	30	8.350435E-6	58.33159	34
CCGTATC	290	0.0	56.722443	55
CGTATCA	285	0.0	56.489544	56
GTATCAT	285	0.0	56.489544	57
TAGAAGG	25	2.381943E-4	56.01507	4
AGATCTC	290	0.0	54.308723	40
ATCATTA	285	0.0	54.033474	59
GTAGATC	300	0.0	53.665062	38
TAGATCT	300	0.0	53.665062	39
CGCCGTA	315	0.0	53.331738	53
CAGCGAA	20	0.006934321	52.51413	4
CACGTCT	20	0.006934321	52.51413	7
CAAGAAA	20	0.0069425283	52.49843	57
CCTATGG	20	0.0069425283	52.49843	8
TGTAGAT	315	0.0	52.22066	37
TATCATT	295	0.0	52.201828	58
TCATTAA	290	0.0	51.895	60