SRR1781306_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781306_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	263598
Sequences flagged as poor quality	0
Sequence length	76
%GC	70

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	70559	26.767653775825313	No Hit
CTTATACACATCTGACGCTGCCGACGAATCTGGCGGTGTAGATCTCGGTG	3563	1.3516794512856698	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	846	0.3209432545011722	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	608	0.23065425382590155	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	395	0.14984939187702487	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	330	0.12519063118840051	No Hit
TCTTATACACATCTGACGCTGCCGACGAATCTGGCGGTGTAGATCTCGGT	320	0.12139697569784293	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTCCG	15	0.0022229974	70.0	35
GACGTAT	25	2.3876458E-4	55.999996	54
CGTATCA	700	0.0	55.0	56
GCCGTAT	690	0.0	54.275364	54
CCGTATC	700	0.0	53.5	55
TCATTAA	695	0.0	52.877697	60
TCTCGGT	695	0.0	52.877697	43
TTTCCGC	20	0.0069461227	52.500004	36
CAATGTT	20	0.0069461227	52.500004	56
GTCTTTC	20	0.0069461227	52.500004	1
CTTAGTC	20	0.0069461227	52.500004	56
AGTGTGC	20	0.0069461227	52.500004	8
TGCGTCC	20	0.0069461227	52.500004	42
GACTAGG	20	0.0069461227	52.500004	1
CATTAAA	715	0.0	51.88811	61
ATCATTA	695	0.0	51.870502	59
GTATCAT	725	0.0	51.655174	57
TAGATCT	725	0.0	51.172413	39
CGCCGTA	740	0.0	50.60811	53
TATCATT	720	0.0	50.555553	58