SRR1781303_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781303_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	243667
Sequences flagged as poor quality	0
Sequence length	76
%GC	73

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	74890	30.734568078566237	No Hit
CTTATACACATCTGACGCTGCCGACGAATCTGGCGGTGTAGATCTCGGTG	1987	0.8154571607973177	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	783	0.32134018968510303	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	643	0.26388472792786877	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	397	0.1629272736973	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	300	0.12311884662264483	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	252	0.10341983116302167	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAAGC	15	0.0022227946	70.00001	24
CCGTTTT	15	0.0022227946	70.00001	24
CCCGTAA	25	2.3872862E-4	56.000004	37
TTGCATA	25	2.3872862E-4	56.000004	31
ATTGCAT	25	2.3872862E-4	56.000004	30
AGATACG	20	0.006945497	52.5	6
TAGAACG	20	0.006945497	52.5	4
TTCGGTA	20	0.006945497	52.5	68
CCAACTT	20	0.006945497	52.5	23
ATACGTC	20	0.006945497	52.5	8
CGTTTTC	20	0.006945497	52.5	25
CGTATCA	335	0.0	50.149254	56
CCGTATC	335	0.0	50.149254	55
GCCGTAT	340	0.0	49.411766	54
TCTCGGT	380	0.0	48.81579	43
TTGTGCG	65	1.8371793E-10	48.461536	2
TCGGTGG	400	0.0	48.125004	45
GTATCAT	360	0.0	47.638893	57
CGCCGTA	355	0.0	47.323944	53
CTTGTAC	30	5.8702345E-4	46.666668	1