SRR1781300_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781300_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	278183
Sequences flagged as poor quality	0
Sequence length	76
%GC	70

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	75057	26.981159883961276	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	937	0.3368286343881545	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	736	0.2645740393913359	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	415	0.14918237275462554	No Hit
CTTATACACATCTGACGCTGCCGACGAACTTCTAGGTGTAGATCTCGGTG	380	0.13660072685965713	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	301	0.1082021546967284	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGATT	15	0.0022231266	70.00001	24
TATGCGC	20	7.918071E-5	70.00001	3
TCGGTAT	15	0.0022231266	70.00001	36
GTCCATA	25	2.3878763E-4	56.000004	29
AAACTCG	20	0.006946525	52.500004	11
GGATATA	20	0.006946525	52.500004	58
TCGTACG	20	0.006946525	52.500004	1
TATAAAG	20	0.006946525	52.500004	33
GCCGTAT	120	0.0	49.583336	54
CGTATCA	140	0.0	47.500004	56
TTGGTCC	30	5.8716774E-4	46.666668	55
CCGTATC	130	0.0	45.769234	55
TGGTCGC	160	0.0	41.562504	49
GTATCAT	145	0.0	41.03448	57
GTAGGTC	35	0.0012541285	40.000004	38
ATGTCGG	35	0.0012541285	40.000004	42
CGGATAC	35	0.0012541285	40.000004	3
ATTGCGC	35	0.0012541285	40.000004	9
GTTATTG	35	0.0012541285	40.000004	50
TCTGGCG	125	0.0	39.2	11