SRR1781299_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781299_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	337068
Sequences flagged as poor quality	0
Sequence length	76
%GC	72

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	89227	26.47151316648273	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1032	0.3061696749617288	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	739	0.21924359476426122	No Hit
CTTATACACATCTGACGCTGCCGACGAACTTCTAGGTGTAGATCTCGGTG	556	0.16495187914604767	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	463	0.13736100727449654	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	411	0.12193385310975827	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAAGTC	25	2.3886052E-4	55.999996	41
TAACGTT	20	0.006947796	52.5	44
ATAACGT	20	0.006947796	52.5	43
ATACGAA	20	0.006947796	52.5	37
GATAGGT	30	5.873458E-4	46.666668	7
TGGTACT	30	5.873458E-4	46.666668	2
TGGATTC	35	0.0012545066	40.0	28
TTTGAGC	35	0.0012545066	40.0	3
GCCGTAT	125	0.0	39.2	54
GTATCAT	175	0.0	38.0	57
TAGATCT	175	0.0	38.0	39
CGTATCA	150	0.0	37.333336	56
GCGTGTG	115	1.8189894E-12	36.52174	8
TGGCGCT	215	0.0	35.813953	13
GAAGCAC	60	1.21400135E-5	35.000004	8
ATAGACG	40	0.002417016	35.0	4
CGATTCT	40	0.002417016	35.0	48
TCGATTC	40	0.002417016	35.0	47
CGCGTCT	80	6.2287654E-8	35.0	7
ATCATTA	180	0.0	34.999996	59