SRR1781297_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781297_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	303592
Sequences flagged as poor quality	0
Sequence length	76
%GC	77

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	115925	38.18447126406493	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1215	0.4002081741284355	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1055	0.34750586313209836	No Hit
CTTATACACATCTGACGCTGCCGACGAACTTCTAGGTGTAGATCTCGGTG	831	0.2737226277372263	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	602	0.19829244512371866	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	432	0.1422962396901104	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	426	0.14031990302774777	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	353	0.11627447363566892	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATGCA	30	8.365307E-6	58.333332	2
TTGTGCG	75	0.0	56.0	2
GTGTTAT	25	2.3882254E-4	55.999996	49
CTCCGTA	25	2.3882254E-4	55.999996	26
TGCCTCG	25	2.3882254E-4	55.999996	42
CGTATCA	165	0.0	53.030304	56
TTCTATA	20	0.0069471337	52.5	45
AAGTATC	20	0.0069471337	52.5	45
GGTACCA	20	0.0069471337	52.5	43
ACGTTCA	20	0.0069471337	52.5	21
TAGACCA	20	0.0069471337	52.5	10
GTGGCTA	20	0.0069471337	52.5	13
CATTCGG	20	0.0069471337	52.5	51
TACTGGC	20	0.0069471337	52.5	70
ACAGCGT	20	0.0069471337	52.5	8
TGCTAAC	20	0.0069471337	52.5	2
ATTATGC	20	0.0069471337	52.5	3
TTCGCCT	20	0.0069471337	52.5	56
GCCGTAT	160	0.0	52.5	54
CCGTATC	175	0.0	50.0	55