SRR1781286_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781286_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	219942
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTAATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	5565	2.5302125105709687	No Hit
CTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	4878	2.217857435141992	No Hit
CAAATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	3993	1.8154786261832665	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3565	1.620881868856335	No Hit
CATATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	2229	1.0134490001909593	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCG	1804	0.8202162388265998	No Hit
TCATATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCG	1722	0.7829336825162998	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCC	1146	0.5210464577024853	No Hit
CACTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCC	434	0.19732474925207555	No Hit
CAAATACCCATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	427	0.19414209200607432	No Hit
CTAATACCCATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	392	0.17822880577606826	No Hit
CAAAAACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	325	0.147766229278628	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCC	230	0.1045730237971829	No Hit
CTAAAACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	229	0.10411835847632558	No Hit
AAAATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	226	0.10275436251375362	No Hit
TCATTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCC	223	0.10139036655118167	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	15	0.002216924	70.04438	43
CAAATAC	975	0.0	63.89432	1
AAATACA	985	0.0	62.165573	2
AATACAC	2030	0.0	60.32817	3
AATCGTA	35	2.9658258E-7	59.99708	38
AATACCC	205	0.0	59.739597	3
AGGGGGG	1905	0.0	59.32745	70
CTAATAC	1060	0.0	58.440544	1
TATGACG	165	0.0	57.30904	43
CTCGAAT	110	0.0	57.269936	39
TAATACA	1075	0.0	56.63552	2
TAAGCCG	50	9.713403E-10	56.0355	43
TCGTATC	25	2.3873466E-4	55.99727	40
CATTATA	50	9.786163E-10	55.984535	2
TCGAAAA	25	2.3900316E-4	55.984535	34
TCGAATG	120	0.0	55.413967	40
GTCTTCA	110	0.0	54.13752	49
TCTCGAA	125	0.0	53.197407	38
CGTCTTA	40	7.4005766E-7	52.557205	48
AGCTTGA	140	0.0	52.52133	55