SRR1781283_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781283_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21102
Sequences flagged as poor quality	0
Sequence length	76
%GC	68

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3904	18.500616055350203	No Hit
CTTATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGGTG	829	3.9285375793763624	No Hit
TCTTATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGGT	93	0.4407165197611601	No Hit
ATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGGTGGTC	53	0.2511610273907687	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	48	0.2274665908444697	No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGG	48	0.2274665908444697	No Hit
TCTTTATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGG	41	0.1942943796796512	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26	0.12321107004075443	No Hit
CTATACACATCTGACGCTGCCGACGAGGGCCGGTGTGTAGATCTCGGTGG	22	0.1042555208037153	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACTAC	15	0.0021946765	70.0	48
TAGATCT	185	0.0	43.513515	39
GTGTAGA	195	0.0	43.076923	36
TGTAGAT	195	0.0	43.076923	37
GTAGATC	190	0.0	42.368423	38
AAAAAGG	75	6.8394E-10	42.0	70
AGATCTC	185	0.0	41.62162	40
GTGTGTA	185	0.0	41.62162	34
GTATCAT	195	0.0	41.28205	57
CCGTATC	195	0.0	41.28205	55
CGTATCA	195	0.0	41.28205	56
ATCATTA	195	0.0	41.28205	59
GCCGTAT	195	0.0	41.28205	54
TCATTAA	195	0.0	41.28205	60
CGCCGTA	195	0.0	41.28205	53
TGTGTAG	195	0.0	41.28205	35
CATTAAA	205	0.0	40.97561	61
GGTGTGT	180	0.0	40.833332	33
TCGGTGG	190	0.0	40.526318	45
TCTCGGT	190	0.0	40.526318	43