SRR1781283_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781283_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21102
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1751	8.297791678513885	No Hit
CAAATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	107	0.5070609420907971	No Hit
AAAATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	42	0.199033266988911	No Hit
TCATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCC	42	0.199033266988911	No Hit
CTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGTC	40	0.18955549237039143	No Hit
TCATATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCG	36	0.17059994313335228	No Hit
CAATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGTC	25	0.11847218273149465	No Hit
CTAATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	23	0.10899440811297507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCAGCAT	20	7.6743876E-5	70.13777	53
CGTCTAC	15	0.0021775563	70.13777	48
ACTCGTA	20	7.765531E-5	69.971565	38
TCGAATG	15	0.0021982158	69.971565	40
ACGTATG	15	0.0021982158	69.971565	40
GGATCAC	15	0.0021982158	69.971565	35
ATCACGT	15	0.0021982158	69.971565	37
GGGAAGT	15	0.0021982158	69.971565	4
AGATCTC	15	0.0021982158	69.971565	35
AAAATAC	80	0.0	61.22512	1
AAATACA	180	0.0	58.309635	2
ACCGAGC	90	0.0	58.309635	13
TAGTATG	30	8.119243E-6	58.309635	40
CGGAACT	30	8.119243E-6	58.309635	34
AGCATGA	30	8.119243E-6	58.309635	55
CGAGACG	30	8.119243E-6	58.309635	23
AAAAACC	30	8.119243E-6	58.309635	2
ACATCAG	25	2.3147398E-4	56.110218	50
ACTCCGA	50	9.094947E-10	55.977257	11
AACTCGT	25	2.3421645E-4	55.977257	37