SRR1781266_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781266_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	696637
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	42278	6.068870875362635	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	7829	1.1238277610864769	No Hit
CTTAAACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	5777	0.8292697631621634	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	4518	0.6485443638509009	No Hit
CATATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	3084	0.4426982775821554	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2838	0.40738576905906515	No Hit
CATAAACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	1149	0.16493525322370187	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	1070	0.15359505739718102	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	4885	61.963867	70
GCCGTAT	95	51.621193	46
ACGTATG	160	50.310333	40
TATGCCG	8795	50.13616	43
ATGCCGT	8750	50.080986	44
CGTATGC	9130	49.732838	41
GTATGCC	8900	49.623375	42
TCGTATG	9405	49.49282	40
CCGTCTT	8370	49.467007	47
CTCGTAT	9050	49.461956	39
TGCCGTC	8785	49.36311	45
TCTCGTA	9120	49.274197	38
GCCGTCT	8565	49.199635	46
CGTCTTC	8680	49.07242	48
GCTTGAA	9040	49.055614	56
GCCGTCA	400	49.04013	46
CGACAAT	200	48.990856	32
AATCTCG	9280	48.907894	36
CTTGAAA	9145	48.79505	57
TAAACAC	1960	48.740902	3