SRR1781265_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781265_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	148203
Sequences flagged as poor quality	0
Sequence length	76
%GC	79

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	54971	37.091691801110635	No Hit
CTTATACACATCTGACGCTGCCGACGATTGGTACGGTGTAGATCTCGGTG	940	0.6342651633232795	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	653	0.4406118634575548	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	416	0.2806960722792386	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	288	0.19432805003947287	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	233	0.15721679048332354	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	180	0.12145503127467056	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	178	0.1201055309271742	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTGCG	15	0.0022210719	70.0	2
AAGCAAG	15	0.0022210719	70.0	62
TGGGGAA	15	0.0022210719	70.0	4
TATCATT	180	0.0	56.388885	58
CGTATCA	175	0.0	56.000004	56
GTATCAT	175	0.0	56.000004	57
TCATTAA	190	0.0	55.263157	60
CCGTATC	185	0.0	54.864864	55
GCCGTAT	185	0.0	54.864864	54
AAGGTCG	20	0.006940154	52.5	5
GGTCACT	20	0.006940154	52.5	40
TGTGCAA	20	0.006940154	52.5	36
CTTGGTA	20	0.006940154	52.5	70
CAAATAA	20	0.006940154	52.5	50
AGCGAGT	20	0.006940154	52.5	15
GCAATTT	20	0.006940154	52.5	13
CATCCCT	20	0.006940154	52.5	41
CGCCGTA	200	0.0	50.749996	53
CATTAAA	210	0.0	50.000004	61
GTAGATC	210	0.0	50.000004	38