SRR1781264_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781264_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	328602
Sequences flagged as poor quality	0
Sequence length	76
%GC	64

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	65079	19.804809465554072	No Hit
CTTATACACATCTGACGCTGCCGACGATTGGTACGGTGTAGATCTCGGTG	900	0.2738875600270236	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	874	0.265975252737354	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	618	0.18806945788522286	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	352	0.10712046792168033	No Hit

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAAATCG	25	2.3885164E-4	56.000004	5
TAACGTT	20	0.006947641	52.500004	12
ATAACGT	20	0.006947641	52.500004	11
CGTATCA	220	0.0	42.954544	56
TTGGGCG	50	3.4732784E-6	42.000004	2
GCCGTAT	210	0.0	41.666664	54
TCGAAAC	55	6.6846223E-6	38.181816	24
ATCGAAA	55	6.6846223E-6	38.181816	23
CCGTATC	225	0.0	37.333332	55
GGTCAAC	50	1.7078314E-4	35.000004	1
TGTGCGC	80	6.228038E-8	35.000004	3
ATTCAAC	40	0.0024169278	35.000004	44
TGCGCGT	90	4.489266E-9	34.999996	5
GTAGATC	255	0.0	34.313725	38
CGGTGGT	300	0.0	33.833332	46
TGGTCGC	260	0.0	33.653847	49
TCGGTGG	340	0.0	32.941177	45
TTGTGCG	75	1.4875459E-6	32.666668	2
CTTGTGG	65	2.0994785E-5	32.307693	1
CTTGTGC	65	2.0994785E-5	32.307693	1