SRR1781261_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781261_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	286312
Sequences flagged as poor quality	0
Sequence length	76
%GC	78

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	104894	36.63625695045964	No Hit
CTTATACACATCTGACGCTGCCGACGATTGGTACGGTGTAGATCTCGGTG	1965	0.686314230629523	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1059	0.3698762189499567	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1015	0.3545083684931124	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	526	0.1837156668250021	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	376	0.13132526754030568	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	334	0.11665595574059068	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	309	0.10792422252647461	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAACAG	15	0.0022231939	70.0	35
CCGCAAA	15	0.0022231939	70.0	30
CGCCAAA	30	8.364097E-6	58.333332	20
GCCGTAT	370	0.0	52.972973	54
CTTGTAC	20	0.006946732	52.500004	1
GCGAATG	20	0.006946732	52.500004	8
TTGTACG	20	0.006946732	52.500004	2
GGATACA	20	0.006946732	52.500004	54
CTAACTT	20	0.006946732	52.500004	60
ACCTACG	20	0.006946732	52.500004	15
AGTTGAA	20	0.006946732	52.500004	68
TGCGACA	20	0.006946732	52.500004	51
AATTCAT	20	0.006946732	52.500004	66
TTTGCAT	20	0.006946732	52.500004	50
GTATCAT	385	0.0	51.81818	57
CCGTATC	375	0.0	51.333336	55
CGTATCA	390	0.0	51.153847	56
TATCATT	375	0.0	50.4	58
AGATCTC	405	0.0	48.39506	40
CGCCGTA	400	0.0	48.124996	53