SRR1781255_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781255_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	383463
Sequences flagged as poor quality	0
Sequence length	76
%GC	68

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	102789	26.805454502781235	No Hit
CTTATACACATCTGACGCTGCCGACGATTGGTACGGTGTAGATCTCGGTG	1694	0.4417636121346779	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	985	0.2568696327937767	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	933	0.24330900243309003	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	540	0.14082193066866946	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGCGC	70	7.2759576E-12	50.0	3
GCCGTAT	365	0.0	48.90411	54
CGTATCA	395	0.0	46.96202	56
CCGTATC	385	0.0	46.363636	55
ATCATTA	410	0.0	42.682926	59
TCTCGGT	420	0.0	42.500004	43
TCATTAA	430	0.0	40.697674	60
CGCCGTA	430	0.0	40.697674	53
GTAGATC	440	0.0	40.568184	38
TCGGTGG	510	0.0	40.490196	45
ATCTCGG	435	0.0	40.22988	42
GTATCAT	435	0.0	40.22988	57
AGATCTC	435	0.0	39.425285	40
GATCTCG	445	0.0	39.325844	41
CGGTGGT	520	0.0	39.03846	46
TGGTCGC	470	0.0	38.723404	49
TAGATCT	460	0.0	38.04348	39
TTGGGCG	65	4.85883E-7	37.692307	2
TGTAGAT	515	0.0	37.37864	37
CATTAAA	470	0.0	37.234043	61