SRR1781245_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781245_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	370326
Sequences flagged as poor quality	0
Sequence length	76
%GC	66

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	73247	19.779059531331853	No Hit
CTTATACACATCTGACGCTGCCGACGAATGACCATGTGTAGATCTCGGTG	2659	0.7180160183189946	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1029	0.277863288021905	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	637	0.1720106068707031	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	422	0.11395365164746736	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	390	0.10531261645145089	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	445	0.0	55.842697	54
CCGTATC	455	0.0	54.615387	55
CGTATCA	475	0.0	53.789474	56
TTACACG	20	0.006948336	52.5	51
TCATTAA	490	0.0	52.142857	60
CGCCGTA	515	0.0	51.650486	53
GTATCAT	515	0.0	50.291264	57
TATCATT	495	0.0	50.20202	58
ATCATTA	495	0.0	50.20202	59
TTGTGCG	65	1.8553692E-10	48.461536	2
TAGATCT	560	0.0	46.875	39
GACGTAT	30	5.8742135E-4	46.666664	54
TACGCGT	45	1.6826762E-6	46.666664	5
CCATAAG	30	5.8742135E-4	46.666664	1
TGTAGGT	45	1.6826762E-6	46.666664	37
TGGTCGC	625	0.0	46.48	49
TCGGTGG	645	0.0	46.124027	45
CATTAAA	575	0.0	45.652172	61
AGATCTC	565	0.0	45.22124	40
ATCTCGG	585	0.0	44.871796	42