SRR1781242_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781242_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	136470
Sequences flagged as poor quality	0
Sequence length	76
%GC	83

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	60167	44.0880779658533	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	816	0.5979336117828093	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	408	0.2989668058914047	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	357	0.26159595515497913	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	317	0.23228548398915513	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	206	0.15094892650399355	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	159	0.11650912288415037	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	158	0.11577636110500476	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAAATG	15	0.0022206933	70.0	59
CTTGGGC	15	0.0022206933	70.0	1
TTGTGCG	30	8.340743E-6	58.333332	2
TGTGCGC	30	8.340743E-6	58.333332	3
TGGGCAG	25	2.3835506E-4	56.000004	5
AAAAAGG	25	2.3835506E-4	56.000004	70
ACTGACT	20	0.006938981	52.5	49
TCTGGCT	20	0.006938981	52.5	66
CACAAAT	20	0.006938981	52.5	58
CTGTGCA	20	0.006938981	52.5	59
CTTGTGC	20	0.006938981	52.5	1
ACCTCAG	20	0.006938981	52.5	8
ATTAAAA	75	1.4551915E-11	46.666668	62
TGTGGGT	45	1.6748108E-6	46.666668	37
TGTGGGC	30	5.861105E-4	46.666664	3
GCCGTAT	90	1.8189894E-12	42.77778	54
CATTAAA	75	7.4760464E-10	42.0	61
TCATTAA	85	5.638867E-11	41.17647	60
TTAAAAA	85	5.638867E-11	41.17647	63
GTGTAGG	35	0.0012518838	40.000004	36