SRR1781240_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781240_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65473
Sequences flagged as poor quality	0
Sequence length	76
%GC	88

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	35056	53.54268171612726	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	555	0.8476776686573092	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	346	0.528462114153926	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	214	0.32685229025705254	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	212	0.3237975959555847	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	127	0.19397308814320405	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	107	0.16342614512852627	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	97	0.14815267362118736	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	92	0.1405159378675179	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	69	0.10538695340063843	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGCGC	25	2.8111517E-6	70.00001	3
CATCTGG	15	0.002215516	70.0	9
CTGCAGA	15	0.002215516	70.0	18
GTTGTGG	15	0.002215516	70.0	1
GTTGTGC	15	0.002215516	70.0	1
CATTAAA	75	0.0	65.333336	61
GTGTAGA	90	0.0	62.222225	36
TGTAGAT	85	0.0	61.764706	37
TCTCGGT	80	0.0	61.25	43
ATTAAAA	80	0.0	61.25	62
TCATTAA	75	0.0	60.666668	60
TAGATCT	75	0.0	60.666668	39
TTAAAAA	75	0.0	60.666668	63
TTGTGCG	35	2.932502E-7	60.0	2
CGTATCA	65	0.0	59.230766	56
TATCATT	65	0.0	59.230766	58
GCCGTAT	65	0.0	59.230766	54
CCGTATC	60	1.8189894E-12	58.333332	55
ATCATTA	80	0.0	56.875	59
CTTGTGC	25	2.3743576E-4	56.000004	1