SRR1781236_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781236_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94815
Sequences flagged as poor quality	0
Sequence length	76
%GC	89

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	55872	58.927384907451355	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	771	0.8131624742920424	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	442	0.466170964509835	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	330	0.348046195222275	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	308	0.32484311554079	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	193	0.2035542899330275	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	152	0.16031218689025997	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	147	0.15503875968992248	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	120	0.1265622528081	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	108	0.11390602752728998	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATGC	15	0.0022185952	70.00001	1
TTGGGCG	25	2.8209233E-6	70.0	2
GCGTCTG	35	2.9467265E-7	60.0	8
GTCTGGC	25	2.3798246E-4	55.999996	10
CTTGGGC	25	2.3798246E-4	55.999996	1
GTTGTGC	25	2.3798246E-4	55.999996	1
CGTCTGG	45	2.6682756E-8	54.444447	9
GGCGTCT	20	0.0069324756	52.5	7
CCGCCAA	20	0.0069324756	52.5	23
CTCTAAT	20	0.0069324756	52.5	42
TCTAATA	20	0.0069324756	52.5	43
TGTGGGC	20	0.0069324756	52.5	3
TCTCTAA	20	0.0069324756	52.5	41
CGCGTCT	20	0.0069324756	52.5	7
TGTGCGC	20	0.0069324756	52.5	3
GTCTGGG	35	2.0728752E-5	50.0	10
TCTGGCG	50	6.120899E-8	48.999996	11
TTGTGCG	30	5.851997E-4	46.666668	2
GGCGCGT	40	4.5628236E-5	43.75	5
TCTGGGG	40	4.5628236E-5	43.75	11