SRR1781235_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781235_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	195753
Sequences flagged as poor quality	0
Sequence length	76
%GC	66

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	41016	20.952935587194066	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	545	0.27841208053005573	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	277	0.141504855608854	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	262	0.13384213779610019	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	196	0.10012617941998335	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGCCG	20	0.0069434666	52.5	43
CGCGTGT	20	0.0069434666	52.5	7
AGTGTCC	20	0.0069434666	52.5	8
GGTAGTA	20	0.0069434666	52.5	40
GCCGTAT	75	0.0	51.333332	54
GTATCAT	90	1.8189894E-12	42.77778	57
TGGTCGC	115	0.0	42.608696	49
GTATCAG	50	3.466057E-6	42.0	1
CCGTATC	95	3.6379788E-12	40.526314	55
TATGCAG	35	0.0012532184	40.0	11
ATCTCGG	90	1.03682396E-10	38.88889	42
CGTATCA	100	7.2759576E-12	38.5	56
ATCATTA	110	0.0	38.181816	59
TATCATT	105	1.2732926E-11	36.666664	58
TCTCGGT	105	1.2732926E-11	36.666664	43
TCGGTGG	125	0.0	36.399998	45
AGCGTGT	40	0.0024145495	35.0	44
CTTGGGG	40	0.0024145495	35.0	1
CGTCGGT	40	0.0024145495	35.0	23
CGGTGGT	125	3.6379788E-12	33.6	46