SRR1781232_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781232_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152686
Sequences flagged as poor quality	0
Sequence length	76
%GC	83

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	67772	44.38651873780176	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	749	0.4905492317566771	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	577	0.37789974195407566	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	494	0.3235398137353785	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	337	0.22071440734579462	No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	170	0.11133961201419908	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	165	0.10806491754319321	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	160	0.10479022307218736	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTCTTC	15	0.0022211997	70.00001	60
ATATCGG	15	0.0022211997	70.00001	42
GATATCG	15	0.0022211997	70.00001	41
TTTGGGA	15	0.0022211997	70.00001	2
GTAGATA	20	7.906648E-5	70.0	38
TAGATAT	25	2.8291997E-6	70.0	39
AGATATC	30	8.345472E-6	58.333336	40
CTTGTGG	20	0.0069405525	52.5	1
CAGCGTG	20	0.0069405525	52.5	12
ACTACAC	20	0.0069405525	52.5	3
TGCACTC	20	0.0069405525	52.5	42
TTCCTTC	20	0.0069405525	52.5	42
ATCTGGC	20	0.0069405525	52.5	10
ACTGGTT	20	0.0069405525	52.5	34
CATCTGG	30	5.863306E-4	46.666668	9
ATCATTA	90	0.0	46.666664	59
GCCGTAT	105	0.0	46.666664	54
CGTATCA	100	0.0	45.499996	56
TATCATT	95	0.0	44.21053	58
TCATTAA	95	0.0	44.21053	60