SRR1781231_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781231_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	286482
Sequences flagged as poor quality	0
Sequence length	76
%GC	72

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	85393	29.807457362068124	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	884	0.3085708700721162	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	763	0.2663343595758198	No Hit
CTTATACACATCTGACGCTGCCGACGAGAATGATCGTGTAGATCTCGGTG	412	0.14381357292953834	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	411	0.143464510859321	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	293	0.10227518657367654	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGGATA	15	0.0022231948	70.0	40
CGTATCA	80	0.0	61.249996	56
GCCGTAT	80	0.0	56.874996	54
CCTACAG	20	0.006946738	52.499996	59
GTCTATG	20	0.006946738	52.499996	2
TTCCGGA	20	0.006946738	52.499996	38
TCGTCAA	20	0.006946738	52.499996	50
CGCGTGT	40	7.4644595E-7	52.499996	7
CCGTATC	95	0.0	51.578945	55
TTGGGCG	70	7.2759576E-12	50.0	2
CTTGTGC	50	6.179653E-8	48.999996	1
TTGTGCG	65	1.8553692E-10	48.46154	2
GTATCAT	95	0.0	47.894733	57
GGTCTAT	30	5.8719737E-4	46.666664	1
CATTAAA	90	1.8189894E-12	42.77778	61
TGTAGAT	160	0.0	39.374996	37
TAGATCT	150	0.0	37.333332	39
TGTGCGC	85	2.564775E-9	37.058826	3
CGGTGGT	210	0.0	36.666668	46
GTTGTGC	50	1.7072857E-4	35.0	1