SRR1781227_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781227_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	143940
Sequences flagged as poor quality	0
Sequence length	76
%GC	66

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26996	18.755036820897597	No Hit
CTTATACACATCTGACGCTGCCGACGATCCGTGCCGTGTAGATCTCGGTG	577	0.4008614700569682	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	386	0.2681672919271919	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	214	0.14867305821870225	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	151	0.10490482145338335	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTATA	15	0.0022209403	70.00001	5
GTATCAT	140	0.0	52.500004	57
CGAACCT	20	0.0069397474	52.5	53
TCTTATC	20	0.0069397474	52.5	70
ATCCAAT	20	0.0069397474	52.5	43
ATAACTA	20	0.0069397474	52.5	7
CACGTTT	20	0.0069397474	52.5	13
TAGATCT	130	0.0	51.153847	39
CGCCGTA	130	0.0	51.153847	53
CGTATCA	145	0.0	50.689655	56
GCCGTAT	125	0.0	50.399998	54
ATCATTA	130	0.0	45.76923	59
ATCTCGG	140	0.0	45.000004	42
GTAGATC	160	0.0	43.75	38
TGTAGAT	160	0.0	43.75	37
AGATCTC	155	0.0	42.90323	40
TCATTAA	140	0.0	42.500004	60
CGGTGGT	170	0.0	41.17647	46
CCGTATC	165	0.0	40.303032	55
TACACCC	35	0.0012521117	40.000004	33