SRR1781218_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781218_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	308774
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTCTA	45	2.6950147E-8	54.444443	1
AATGCGT	20	0.0069472464	52.5	8
AGCCTTA	55	2.2773747E-9	50.90909	6
CTCAACG	55	1.3084355E-7	44.545452	46
CAACGGC	55	1.3084355E-7	44.545452	48
GGTGCAA	35	0.0012543428	40.0	1
CGAATTC	45	9.186271E-5	38.888885	14
CGCTTGT	45	9.186271E-5	38.888885	8
CAAGTGA	60	1.2136721E-5	35.0	28
TGCTACC	60	1.2136721E-5	35.0	38
ACGTAAG	40	0.002416703	35.0	29
GCCTTAC	105	5.475158E-10	33.333336	7
CCTAACG	55	2.988423E-4	31.81818	20
CTGGTCA	55	2.988423E-4	31.81818	17
GCTCTAG	55	2.988423E-4	31.81818	1
GTTCGAA	55	2.988423E-4	31.81818	11
CTGAATA	45	0.00430363	31.111109	19
GTAGCGA	45	0.00430363	31.111109	22
TATCGTG	45	0.00430363	31.111109	42
GCGCTTG	80	2.4608944E-6	30.625	7