SRR1781217_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781217_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	229834
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACGAAT	20	0.0069449972	52.5	66
GTTAAGC	35	0.0012536738	40.0	21
CGGTATG	35	0.0012536738	40.0	43
CGTCCAA	35	0.0012536738	40.0	40
ACTAATG	45	9.178936E-5	38.888885	13
CAAGTGC	40	0.0024154212	35.0	44
GCGGTAT	40	0.0024154212	35.0	42
GACGCTC	40	0.0024154212	35.0	58
CTTTAGA	40	0.0024154212	35.0	2
GCACTTT	80	6.2140316E-8	35.0	49
AGAGATC	50	1.7062368E-4	35.0	6
CTTACGT	40	0.0024154212	35.0	23
AAGAGAT	55	2.9860612E-4	31.81818	5
ACTTATG	55	2.9860612E-4	31.81818	48
TACGGAC	55	2.9860612E-4	31.81818	38
GCATAAG	45	0.004301361	31.111109	52
ATCTCAG	45	0.004301361	31.111109	52
AAGCGCG	45	0.004301361	31.111109	7
GAATAAG	45	0.004301361	31.111109	36
TTATCTT	45	0.004301361	31.111109	32