SRR1781216_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781216_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	189827
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCGAA	25	2.385937E-4	55.999996	43
GACTGAC	20	0.006943143	52.5	7
ATCGAAT	20	0.006943143	52.5	68
CGAATAC	30	5.8669376E-4	46.666664	70
GGACTGA	35	0.0012531222	40.0	6
GACCGGA	35	0.0012531222	40.0	6
TCTATCG	35	0.0012531222	40.0	31
TACCGTT	40	0.002414365	35.0	12
TGCCGAA	50	1.7051188E-4	35.0	31
TCTATAC	55	2.984115E-4	31.81818	3
TCTACTG	45	0.004299493	31.111109	32
CAAATTC	45	0.004299493	31.111109	40
TGGCTAA	45	0.004299493	31.111109	64
GAGCACA	60	4.9688155E-4	29.166666	46
TCAATCC	50	0.007195449	27.999998	48
TGGATGG	50	0.007195449	27.999998	19
TAGTGAT	50	0.007195449	27.999998	4
GACTGAG	50	0.007195449	27.999998	7
TGAGAGC	50	0.007195449	27.999998	10
ACCGAAC	65	7.9347467E-4	26.923077	12