SRR1781211_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781211_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	261218
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCCAA	20	0.0069460543	52.5	40
GGTGACA	65	9.973519E-9	43.076923	19
GATCCTA	60	2.5895315E-7	40.833332	1
CGAAGCA	35	0.001253988	40.000004	48
GTGCGTC	45	9.1823815E-5	38.88889	54
CACTAAC	50	1.706874E-4	35.0	27
GTACAAG	45	0.0043024267	31.111113	1
CCAGAGT	45	0.0043024267	31.111113	3
GCGTCAT	45	0.0043024267	31.111113	56
CGTCATA	45	0.0043024267	31.111113	57
CTTACCG	45	0.0043024267	31.111113	9
GGTCGAT	80	2.458979E-6	30.625	10
GTTCTAG	60	4.9738795E-4	29.166666	1
AGTGCGT	60	4.9738795E-4	29.166666	53
GCTTAAC	60	4.9738795E-4	29.166666	13
CGTATTG	75	5.5717923E-5	28.0	57
TGGTTCG	50	0.0072003324	27.999998	35
GTATACC	50	0.0072003324	27.999998	1
CCGAAAT	50	0.0072003324	27.999998	47
TATAAGA	105	6.74303E-7	26.666666	2