##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781209_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 31966 Sequences flagged as poor quality 0 Sequence length 76 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.89532628417694 34.0 23.0 34.0 12.0 34.0 2 28.351811299505727 34.0 23.0 34.0 12.0 34.0 3 28.136050803979227 34.0 23.0 34.0 11.0 34.0 4 28.377526121504097 34.0 23.0 34.0 11.0 34.0 5 28.289401238816243 34.0 23.0 34.0 11.0 34.0 6 30.155289995620347 36.0 24.0 38.0 11.0 38.0 7 30.29559532002753 36.0 24.0 38.0 12.0 38.0 8 29.89726584496027 35.0 23.0 38.0 11.0 38.0 9 30.410529938059188 36.0 25.0 38.0 11.0 38.0 10-11 30.063176500031283 35.5 24.0 38.0 11.0 38.0 12-13 30.033254082462616 35.5 23.5 38.0 11.0 38.0 14-15 29.881608584120627 35.0 23.5 38.0 11.0 38.0 16-17 29.77483889132203 35.0 23.0 38.0 11.0 38.0 18-19 29.771413376712758 35.0 23.0 38.0 11.0 38.0 20-21 29.73169930551211 34.5 23.0 38.0 11.0 38.0 22-23 29.688278170556217 34.5 23.0 38.0 11.0 38.0 24-25 29.664127510479886 34.5 23.0 38.0 11.0 38.0 26-27 29.567665644747546 34.0 22.5 38.0 11.0 38.0 28-29 29.650128261277608 34.5 23.0 38.0 11.0 38.0 30-31 29.651833197772632 34.5 23.0 38.0 11.0 38.0 32-33 29.689326159043986 34.5 23.0 38.0 11.0 38.0 34-35 29.690859037727584 34.5 23.0 38.0 11.0 38.0 36-37 29.504848901958333 34.0 22.5 38.0 11.0 38.0 38-39 29.510104486016395 34.0 23.0 38.0 11.0 38.0 40-41 29.51448413939811 34.0 22.5 38.0 11.0 38.0 42-43 29.52593380466746 34.0 23.0 38.0 11.0 38.0 44-45 29.63425201776888 34.5 23.0 38.0 11.0 38.0 46-47 29.582009009572673 34.5 23.0 38.0 11.0 38.0 48-49 29.483419883626354 34.0 22.5 38.0 11.0 38.0 50-51 29.38645748607896 34.0 22.0 38.0 11.0 38.0 52-53 29.406901082400047 34.0 22.0 38.0 11.0 38.0 54-55 29.387802665331918 34.0 22.0 38.0 11.0 38.0 56-57 29.30529312394419 34.0 22.0 38.0 11.0 38.0 58-59 29.208956391165614 34.0 22.0 38.0 11.0 38.0 60-61 29.252142901833196 34.0 22.0 38.0 11.0 38.0 62-63 29.16656760307827 34.0 22.0 38.0 11.0 38.0 64-65 29.13534693111431 34.0 22.0 38.0 11.0 38.0 66-67 29.009525746105236 34.0 22.0 38.0 11.0 38.0 68-69 28.701589188512795 34.0 21.0 38.0 11.0 38.0 70-71 28.78012575861853 34.0 21.5 38.0 11.0 38.0 72-73 28.8158668585372 34.0 21.0 38.0 11.0 38.0 74-75 28.706891697428517 34.0 21.0 38.0 11.0 38.0 76 27.166051429643996 31.0 19.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 8.0 13 27.0 14 122.0 15 347.0 16 817.0 17 1294.0 18 1668.0 19 1564.0 20 1273.0 21 1004.0 22 711.0 23 650.0 24 657.0 25 617.0 26 689.0 27 770.0 28 884.0 29 895.0 30 1074.0 31 1233.0 32 1362.0 33 1615.0 34 1882.0 35 2261.0 36 3158.0 37 5383.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.78814990927861 15.991991490959146 10.680097603703935 31.539760996058313 2 22.661577926546954 16.39241694300194 30.763936682725397 30.182068447725708 3 23.60633172746043 15.206782206093974 24.319589563911656 36.86729650253394 4 19.495714196333605 12.938747419132829 24.604267033723332 42.961271350810236 5 20.021272602139774 24.698116749045862 28.968278796220986 26.312331852593378 6 37.924669961834454 22.93061377713821 14.884564850153287 24.26015141087405 7 33.616968028530316 20.22774197584934 17.72821122442595 28.42707877119439 8 27.32590877807671 26.521929550147032 19.020208972032783 27.13195269974348 9 24.32897453544391 13.295376337358444 17.994118751173122 44.38153037602453 10-11 30.656009510104486 18.128636676468748 21.45873740849653 29.756616404930234 12-13 28.251892635925667 16.223487455421385 21.693361696802853 33.83125821185009 14-15 27.153850966652065 16.791278233122693 19.084339610836516 36.97053118938873 16-17 28.513107676906714 18.593192767315273 19.728774322717886 33.164925233060124 18-19 28.362948132390663 17.551460927235187 20.629731589814178 33.45585935055997 20-21 28.400488018519678 18.830945379465682 20.058812488268785 32.70975411374585 22-23 28.777451041731837 18.28818119251705 19.874241381467808 33.0601263842833 24-25 28.605393230307204 17.761058624788838 19.239191641118687 34.394356503785275 26-27 28.197146968654195 18.148970781455294 20.687605580929738 32.966276668960774 28-29 28.208096102108488 18.12394419070262 20.426390539948695 33.24156916724019 30-31 28.219045235562785 17.700056309829193 20.03222173559407 34.048676719013955 32-33 27.79515735468936 18.00663204654946 20.467058749921794 33.73115184883939 34-35 28.768066070199588 17.933116436213478 20.556215979478196 32.742601514108735 36-37 28.847838328223734 16.778764937746356 20.426390539948695 33.94700619408121 38-39 27.03653882249891 16.719326784708752 22.41756866670838 33.82656572608396 40-41 28.10016892948758 16.91953951073015 22.99474441594194 31.985547143840332 42-43 26.417130701370205 16.50816492523306 22.356566351748732 34.718138021647995 44-45 25.747669398736157 16.806919852343114 23.845648501532878 33.59976224738785 46-47 26.035475192391917 17.565538384533568 23.454608021022334 32.94437840205218 48-49 25.933804667459174 17.585872489520117 22.80078833760871 33.679534505412 50-51 25.52555840580617 18.386723393605706 22.76794093724582 33.3197772633423 52-53 25.28780579365576 18.536882938121753 23.11831320778327 33.05699806043922 54-55 25.19395607833323 17.599949946818494 22.88838140524307 34.317712569605206 56-57 25.240880935994493 18.657323406119 23.004129387474194 33.09766627041231 58-59 25.48801851967716 18.308515297503597 22.860226490646312 33.34323969217293 60-61 25.886879809797907 17.662516423700183 22.270537446036414 34.1800663204655 62-63 25.067258962647816 18.075455171119316 22.81486579490709 34.042420071325786 64-65 26.033911030469874 17.803290996683977 22.098479634611774 34.06431833823437 66-67 25.77269598948883 18.455546518175563 21.144340862166054 34.627416630169556 68-69 25.25339423137083 19.78195582806732 21.54789463805293 33.41675530250892 70-71 25.794594256397424 19.602077207032472 21.608896953012575 32.994431583557535 72-73 25.660076331101795 18.444597384721266 21.721516611399615 34.17380967277733 74-75 26.410874053682036 18.357004317086904 22.187636864168176 33.04448476506288 76 26.959894888318836 17.43102045923794 21.019207908402677 34.589876744040545 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 1.0 14 3.5 15 4.0 16 4.0 17 5.0 18 9.5 19 10.0 20 8.5 21 11.0 22 23.0 23 38.5 24 48.5 25 55.0 26 66.5 27 100.5 28 129.5 29 136.0 30 165.0 31 204.5 32 249.5 33 284.0 34 304.5 35 352.0 36 415.5 37 452.0 38 489.0 39 562.0 40 603.0 41 618.5 42 629.0 43 651.0 44 670.5 45 677.0 46 686.0 47 694.5 48 671.0 49 627.0 50 615.0 51 589.5 52 578.5 53 547.5 54 502.0 55 537.5 56 584.0 57 633.5 58 672.0 59 728.5 60 826.0 61 934.5 62 1002.0 63 1019.0 64 1076.5 65 1206.0 66 1349.5 67 1404.0 68 1397.0 69 1420.5 70 1440.0 71 1429.0 72 1419.0 73 1346.0 74 1261.0 75 1239.0 76 1152.5 77 987.0 78 806.5 79 705.0 80 602.0 81 423.0 82 286.5 83 226.0 84 173.0 85 108.0 86 70.5 87 45.0 88 32.5 89 16.0 90 6.5 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 31966.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.2562097228305 #Duplication Level Percentage of deduplicated Percentage of total 1 87.1316919238249 74.28517800162673 2 9.547572744285032 16.2797972846149 3 2.506146112354603 6.409935556528811 4 0.5834220085862106 1.98961396483764 5 0.17979671962719698 0.7664393418006632 6 0.04403184970461968 0.22523931677407247 7 0.007338641617436612 0.04379653381718076 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0031283238440843394 0.0 2 0.0 0.0 0.0 0.0031283238440843394 0.0 3 0.0 0.0 0.0 0.0031283238440843394 0.0 4 0.0 0.0 0.0 0.0031283238440843394 0.0 5 0.0 0.0 0.0 0.0031283238440843394 0.0 6 0.0 0.0 0.0 0.0031283238440843394 0.0 7 0.0 0.0 0.0 0.0031283238440843394 0.0 8 0.0 0.0 0.0 0.0031283238440843394 0.0 9 0.0 0.0 0.0 0.009384971532253018 0.0 10 0.0 0.0 0.0 0.009384971532253018 0.0 11 0.0 0.0 0.0 0.009384971532253018 0.0 12 0.0 0.0 0.0 0.009384971532253018 0.0 13 0.0 0.0 0.0 0.012513295376337358 0.0 14 0.0 0.0 0.0 0.012513295376337358 0.0 15 0.0 0.0 0.0 0.012513295376337358 0.0 16 0.0 0.0 0.0 0.018769943064506037 0.0 17 0.0 0.0 0.0 0.021898266908590376 0.0 18 0.0 0.0 0.0 0.025026590752674716 0.0031283238440843394 19 0.0 0.0 0.0 0.031283238440843394 0.0031283238440843394 20 0.0 0.0 0.0 0.034411562284927734 0.0031283238440843394 21 0.0 0.0 0.0 0.034411562284927734 0.0031283238440843394 22 0.0 0.0 0.0 0.05630982919351811 0.0031283238440843394 23 0.0 0.0 0.0 0.05630982919351811 0.0031283238440843394 24 0.0 0.0 0.0 0.05943815303760245 0.0031283238440843394 25 0.0 0.0 0.0 0.05943815303760245 0.0031283238440843394 26 0.0 0.0 0.0 0.06256647688168679 0.0031283238440843394 27 0.0 0.0 0.0 0.07507977225802415 0.0031283238440843394 28 0.0 0.0 0.0 0.10323468685478321 0.0031283238440843394 29 0.0 0.0 0.0 0.14077457298379528 0.0031283238440843394 30 0.0 0.0 0.0 0.17831445911280736 0.0031283238440843394 31 0.0 0.0 0.0 0.21585434524181943 0.0031283238440843394 32 0.0 0.0 0.0 0.26277920290308454 0.0031283238440843394 33 0.0 0.0 0.0 0.3847838328223738 0.0031283238440843394 34 0.0 0.0 0.0 0.4942751673653257 0.0031283238440843394 35 0.0 0.0 0.0 0.6882312456985548 0.0031283238440843394 36 0.0 0.0 0.0 1.013576925483326 0.0031283238440843394 37 0.0 0.0 0.0 1.4796971782518926 0.0031283238440843394 38 0.0 0.0 0.0 1.942689107176375 0.0031283238440843394 39 0.0 0.0 0.0 2.41506600763311 0.0031283238440843394 40 0.0 0.0 0.0 2.8592879934930866 0.0031283238440843394 41 0.0 0.0 0.0 3.287868360132641 0.0031283238440843394 42 0.0 0.0 0.0 3.722705374460364 0.0031283238440843394 43 0.0 0.0 0.0 4.141900769567665 0.0031283238440843394 44 0.0 0.0 0.0 4.576737783895389 0.0031283238440843394 45 0.0 0.0 0.0 5.092911218169305 0.0031283238440843394 46 0.0 0.0 0.0 5.643496214728149 0.0031283238440843394 47 0.0 0.0 0.0 6.137771382093474 0.0031283238440843394 48 0.0 0.0 0.0 6.685228054808234 0.0031283238440843394 49 0.0 0.0 0.0 7.204529812926234 0.0031283238440843394 50 0.0 0.0 0.0 7.7488581617969094 0.0031283238440843394 51 0.0 0.0 0.0 8.224363386097728 0.0031283238440843394 52 0.0 0.0 0.0 8.64355878120503 0.0031283238440843394 53 0.0 0.0 0.0 9.090909090909092 0.0031283238440843394 54 0.0 0.0 0.0 9.569542639053996 0.0031283238440843394 55 0.0 0.0 0.0 10.063817806419321 0.0031283238440843394 56 0.0 0.0 0.0 10.504911468435212 0.0031283238440843394 57 0.0 0.0 0.0 10.814615528999562 0.0031283238440843394 58 0.0 0.0 0.0 11.283864105612214 0.0031283238440843394 59 0.0 0.0 0.0 11.74372771069261 0.0031283238440843394 60 0.0 0.0 0.0 12.090971657385973 0.0031283238440843394 61 0.0 0.0 0.0 12.50703872864919 0.0031283238440843394 62 0.0 0.0 0.0 12.829256084589877 0.0031283238440843394 63 0.0 0.0 0.0 13.173371707439154 0.0031283238440843394 64 0.0 0.0 0.0 13.561283864105611 0.0031283238440843394 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATGTG 15 0.0022051055 70.00001 13 TACCGGA 15 0.0022051055 70.00001 2 TCATCTT 25 2.355906E-4 55.999996 5 AACCCCG 20 0.006890646 52.5 31 TCTTAAA 20 0.006890646 52.5 41 TCGCTCC 20 0.006890646 52.5 23 >>END_MODULE