SRR1781204_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781204_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	304382
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGAGA	20	0.0069471514	52.5	57
TGCACGG	50	1.7075357E-4	35.000004	47
ACGGTTA	50	1.7075357E-4	35.000004	50
ATTCGGG	40	0.002416649	35.0	45
CTTTGCG	40	0.002416649	35.0	38
CATCGTT	60	1.213615E-5	35.0	32
GGCGCTA	65	2.0989723E-5	32.307693	18
TGCTACC	55	2.9883228E-4	31.818184	38
ACCTTTG	55	2.9883228E-4	31.818184	42
TGCCGAG	55	2.9883228E-4	31.818184	57
CTCGTAA	45	0.0043035336	31.111113	29
ATTCGCA	45	0.0043035336	31.111113	6
CACTACG	45	0.0043035336	31.111113	4
CGTCCCG	45	0.0043035336	31.111113	35
GCCAACT	45	0.0043035336	31.111113	16
CTCAACG	80	2.4607434E-6	30.625	46
TAACCGG	80	2.4607434E-6	30.625	22
TCGTTGT	60	4.975788E-4	29.166666	34
CGGCTAC	85	3.946432E-6	28.82353	51
ACGTTGG	50	0.0072021727	28.000002	28