##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781203_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 91801 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.668881602596922 34.0 32.0 34.0 21.0 34.0 2 30.949608392065446 34.0 32.0 34.0 21.0 34.0 3 30.870241064912147 34.0 32.0 34.0 21.0 34.0 4 31.078702846374224 34.0 33.0 34.0 23.0 34.0 5 31.039422228516028 34.0 33.0 34.0 23.0 34.0 6 33.72343438524635 37.0 34.0 38.0 22.0 38.0 7 33.75857561464472 37.0 34.0 38.0 22.0 38.0 8 33.50413394189606 37.0 34.0 38.0 21.0 38.0 9 33.74962146381848 37.0 34.0 38.0 22.0 38.0 10-11 33.61523294953214 37.0 34.0 38.0 21.0 38.0 12-13 33.575565625646774 37.0 34.0 38.0 21.0 38.0 14-15 33.47402533741462 37.0 34.0 38.0 21.0 38.0 16-17 33.443540920033556 37.0 34.0 38.0 21.0 38.0 18-19 33.46692846483154 37.0 34.0 38.0 21.0 38.0 20-21 33.41533316630538 37.0 34.0 38.0 21.0 38.0 22-23 33.4903486890121 37.0 34.0 38.0 21.0 38.0 24-25 33.46169431705537 37.0 34.0 38.0 21.0 38.0 26-27 33.38839446193397 37.0 34.0 38.0 21.0 38.0 28-29 33.47690656964521 37.0 34.0 38.0 21.0 38.0 30-31 33.546894913998756 37.0 34.0 38.0 21.0 38.0 32-33 33.48611126240455 37.0 34.0 38.0 21.0 38.0 34-35 33.49822442021329 37.0 34.0 38.0 21.0 38.0 36-37 33.38168429537805 37.0 34.0 38.0 21.0 38.0 38-39 33.394957571268286 37.0 34.0 38.0 21.0 38.0 40-41 33.37295890022985 37.0 34.0 38.0 21.0 38.0 42-43 33.423383187546975 37.0 34.0 38.0 21.0 38.0 44-45 33.48823542227208 37.0 34.0 38.0 21.0 38.0 46-47 33.45540898247296 37.0 34.0 38.0 21.0 38.0 48-49 33.43399309375715 37.0 34.0 38.0 21.0 38.0 50-51 33.279740961427436 37.0 34.0 38.0 21.0 38.0 52-53 33.37764294506596 37.0 34.0 38.0 21.0 38.0 54-55 33.33986013224256 37.0 34.0 38.0 21.0 38.0 56-57 33.28825938715264 37.0 34.0 38.0 21.0 38.0 58-59 33.26280214812475 37.0 34.0 38.0 21.0 38.0 60-61 33.252638860143136 37.0 34.0 38.0 21.0 38.0 62-63 33.229469177895666 37.0 34.0 38.0 21.0 38.0 64-65 33.23436563871853 37.0 34.0 38.0 21.0 38.0 66-67 33.09227023670766 37.0 34.0 38.0 21.0 38.0 68-69 32.87793161294539 37.0 32.5 38.0 16.0 38.0 70-71 33.03358351216218 37.0 33.0 38.0 21.0 38.0 72-73 32.97839892811625 37.0 32.5 38.0 21.0 38.0 74-75 33.00560451411205 37.0 32.0 38.0 21.0 38.0 76 31.68134334048649 36.0 28.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 6.0 13 22.0 14 90.0 15 289.0 16 653.0 17 1080.0 18 1402.0 19 1394.0 20 1213.0 21 1036.0 22 1017.0 23 932.0 24 1161.0 25 1304.0 26 1481.0 27 1812.0 28 2039.0 29 2453.0 30 2895.0 31 3504.0 32 4182.0 33 5132.0 34 6454.0 35 8482.0 36 13197.0 37 28571.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.148734763237876 17.878890208167668 9.949782682105859 26.022592346488597 2 22.92894412914892 19.82984934804632 31.887452206402983 25.353754316401783 3 20.374505724338515 20.969270487249595 28.484439167329334 30.17178462108256 4 14.420322218712215 15.71551508153506 35.59547281620026 34.26868988355247 5 14.663238962538536 33.400507619742704 34.64232415768891 17.29392926002985 6 31.387457652966745 35.145586649382906 17.467129987690765 15.999825709959586 7 30.177231184845482 28.31123843966841 20.62831559569068 20.883214779795427 8 26.24263352251065 34.12707922571649 19.117438807856125 20.512848443916734 9 25.09776581954445 15.36148843694513 20.594546900360562 38.94619884314985 10-11 26.20069498153615 23.74266075532946 26.283482750732563 23.773161512401824 12-13 25.784577510048912 21.807496650363287 25.81398895436869 26.593936885219115 14-15 24.0471236696768 23.089617760155118 23.372294419450768 29.490964150717314 16-17 24.480125488829096 25.8412217731833 23.993202688423874 25.68545004956373 18-19 23.9283885796451 25.274779141839414 25.504624132634724 25.292208145880764 20-21 24.006274441454885 25.560723739392817 25.330334092221218 25.102667726931077 22-23 24.327077047090988 24.861929608609927 25.758978660363173 25.0520146839359 24-25 24.45833923377741 24.90168952407926 24.9267437173887 25.713227524754632 26-27 23.450724937636842 25.31617302643762 25.693619895208116 25.539482140717425 28-29 23.750830600973845 25.044934151044107 26.306358318536837 24.89787692944521 30-31 24.146251130161982 24.975762791254997 25.837409178549255 25.040576900033766 32-33 23.82326989902071 25.36192416204617 25.67510157841418 25.139704360518948 34-35 24.43328504046797 24.59940523523709 25.857561464472063 25.10974825982288 36-37 24.182743107373557 24.674023158789122 25.530767638696744 25.612466095140572 38-39 23.829805775536215 24.848313199202625 26.44361172536247 24.878269299898694 40-41 23.894075227938693 24.154420975806364 27.101011971547152 24.85049182470779 42-43 23.63046154181327 24.243199965141994 26.607553294626417 25.51878519841832 44-45 22.654981971873944 24.446356793498982 27.298177579764925 25.60048365486215 46-47 23.178396749490744 24.33252361085391 27.17835317698064 25.310726462674698 48-49 22.930578098277795 24.659862093005522 27.01495626409298 25.394603544623696 50-51 22.529166348950447 25.04112155641006 26.843389505560943 25.586322589078552 52-53 22.572738859053825 24.565636539906972 27.348285966383806 25.513338634655398 54-55 22.021001949869827 24.905502118713304 27.221381030707725 25.852114900709143 56-57 22.163157264082088 24.742105205825645 27.126610821232884 25.96812670885938 58-59 22.196925959412205 24.725220858160586 27.20830927767671 25.869543904750493 60-61 22.155532074813998 24.59722660973192 26.990446727159835 26.256794588294248 62-63 21.891918388688577 24.314005294059978 27.46102983627629 26.333046480975153 64-65 22.48831712072853 24.571627760046187 26.750253265214972 26.1898018540103 66-67 22.454548425398414 24.792758248820817 26.18544460299997 26.567248722780796 68-69 22.0858160586486 24.966503632858032 26.176185444603 26.77149486389037 70-71 22.152264136556248 25.00190629731702 26.422914783063366 26.422914783063366 72-73 22.224158778226816 24.242110652389407 26.606463981873834 26.92726658750994 74-75 22.036252328406007 24.699077352098563 26.766048300127448 26.49862201936798 76 22.1206740667313 25.002995610069608 26.219757954706374 26.65657236849272 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 3.0 14 4.5 15 8.5 16 27.5 17 42.0 18 58.5 19 93.0 20 125.5 21 140.0 22 184.0 23 246.5 24 307.0 25 349.0 26 438.5 27 578.0 28 718.5 29 809.0 30 932.0 31 1130.5 32 1384.5 33 1563.0 34 1784.0 35 2192.0 36 2519.0 37 2659.0 38 2926.0 39 3435.5 40 4004.5 41 4444.5 42 4558.0 43 4650.0 44 4708.5 45 4684.0 46 4693.0 47 4595.0 48 4339.0 49 4057.5 50 3934.0 51 3653.5 52 3104.0 53 2746.0 54 2657.0 55 2548.0 56 2280.5 57 1984.0 58 1846.0 59 1739.5 60 1628.5 61 1544.5 62 1465.0 63 1420.5 64 1363.5 65 1307.5 66 1226.0 67 1188.0 68 1205.5 69 1224.5 70 1255.0 71 1284.0 72 1196.0 73 1087.5 74 1016.0 75 965.0 76 882.5 77 742.0 78 631.0 79 578.0 80 500.0 81 349.0 82 222.0 83 168.0 84 154.5 85 103.5 86 49.5 87 33.0 88 26.0 89 14.5 90 6.0 91 2.5 92 3.0 93 2.5 94 2.5 95 1.5 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 91801.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.907800568621255 #Duplication Level Percentage of deduplicated Percentage of total 1 73.34151496556896 46.870949118201324 2 14.605918047317108 18.668641953791354 3 6.033953773777869 11.56850143244627 4 2.6539169564328082 6.784239823095609 5 1.1761096338719574 3.758128996416161 6 0.6391900184086725 2.4509536933148874 7 0.44487625281243603 1.9901743989716887 8 0.28635712824708526 1.4640363394734264 9 0.20965432603804457 1.2058692171109247 >10 0.6085088975250562 5.238505027178353 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0010893127525843946 0.0 2 0.0 0.0 0.0 0.0010893127525843946 0.0 3 0.0 0.0 0.0 0.0010893127525843946 0.0 4 0.0 0.0 0.0 0.005446563762921973 0.0 5 0.0 0.0 0.0 0.006535876515506367 0.0 6 0.0 0.0 0.0 0.008714502020675157 0.0 7 0.0 0.0 0.0 0.008714502020675157 0.0 8 0.0 0.0 0.0 0.008714502020675157 0.0 9 0.0 0.0 0.0 0.008714502020675157 0.0 10 0.0 0.0 0.0 0.010893127525843945 0.0 11 0.0 0.0 0.0 0.010893127525843945 0.0 12 0.0 0.0 0.0 0.010893127525843945 0.0 13 0.0 0.0 0.0 0.01198244027842834 0.0 14 0.0 0.0 0.0 0.01198244027842834 0.0 15 0.0 0.0 0.0 0.01198244027842834 0.0 16 0.0 0.0 0.0 0.01198244027842834 0.0 17 0.0 0.0 0.0 0.01198244027842834 0.0 18 0.0 0.0 0.0 0.01198244027842834 0.0 19 0.0 0.0 0.0 0.01198244027842834 0.0 20 0.0 0.0 0.0 0.013071753031012734 0.0 21 0.0 0.0 0.0 0.013071753031012734 0.0 22 0.0 0.0 0.0 0.022875567804272284 0.0 23 0.0 0.0 0.0 0.025054193309441072 0.0 24 0.0 0.0 0.0 0.030500757072363046 0.0 25 0.0 0.0 0.0 0.03159006982494744 0.0 26 0.0 0.0 0.0 0.032679382577531835 0.0 27 0.0 0.0 0.0 0.04357251010337578 0.0 28 0.0 0.0 0.0 0.07843051818607641 0.0 29 0.0 0.0 0.0 0.10130608599034868 0.0 30 0.0 0.0 0.0 0.12527096654720538 0.0 31 0.0 0.0 0.0 0.14487859609372447 0.0 32 0.0 0.0 0.0 0.1764686659186719 0.0 33 0.0 0.0 0.0 0.23638086731081362 0.0 34 0.0 0.0 0.0 0.3191686365072276 0.0 35 0.0 0.0 0.0 0.46295791984836765 0.0 36 0.0 0.0 0.0 0.6503197132928835 0.0 37 0.0 0.0 0.0 0.9509700330061764 0.0 38 0.0 0.0 0.0 1.2832104225444168 0.0 39 0.0 0.0 0.0 1.6078256228145662 0.0 40 0.0 0.0 0.0 1.8899576257339246 0.0 41 0.0 0.0 0.0 2.1971438219627237 0.0 42 0.0 0.0 0.0 2.5468132155423144 0.0 43 0.0 0.0 0.0 2.9553054977614623 0.0 44 0.0 0.0 0.0 3.3910305987952203 0.0 45 0.0 0.0 0.0 3.8953824032417947 0.0 46 0.0 0.0 0.0 4.462914347338264 0.0 47 0.0 0.0 0.0 5.065304299517434 0.0 48 0.0 0.0 0.0 5.553316412675243 0.0 49 0.0 0.0 0.0 6.051132340606311 0.0 50 0.0 0.0 0.0 6.559841396063224 0.0 51 0.0 0.0 0.0 7.027156566921929 0.0 52 0.0 0.0 0.0 7.481399984749621 0.0 53 0.0 0.0 0.0 7.941089966340236 0.0 54 0.0 0.0 0.0 8.43999520702389 0.0 55 0.0 0.0 0.0 8.910578316140347 0.0 56 0.0 0.0 0.0 9.461770568948051 0.0 57 0.0 0.0 0.0 9.975926188167884 0.0 58 0.0 0.0 0.0 10.41818716571715 0.0 59 0.0 0.0 0.0 10.907288591627543 0.0 60 0.0 0.0 0.0 11.356085445692313 0.0 61 0.0 0.0 0.0 11.812507489025174 0.0 62 0.0 0.0 0.0 12.234071524275334 0.0 63 0.0 0.0 0.0 12.659992810535833 0.0 64 0.0 0.0 0.0 13.093539286064422 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCA 20 7.88988E-5 70.0 24 TTACTCG 25 2.8202103E-6 70.0 19 ATCCGTA 20 7.88988E-5 70.0 12 GAAGTCG 15 0.0022183713 70.0 63 TCCGTAT 20 7.88988E-5 70.0 13 GTATTAC 25 2.379426E-4 55.999996 16 CATCCGT 25 2.379426E-4 55.999996 11 GATACTT 20 0.0069317794 52.5 7 GTTTCGG 20 0.0069317794 52.5 21 TTTCGGG 20 0.0069317794 52.5 22 GCTGCCA 20 0.0069317794 52.5 48 TACGGAG 20 0.0069317794 52.5 52 CTGCGGA 20 0.0069317794 52.5 18 CTACGGA 20 0.0069317794 52.5 51 GTATCAA 20 0.0069317794 52.5 34 GGACAGT 20 0.0069317794 52.5 6 TCGCATC 30 5.8510236E-4 46.666664 23 CGTATTA 30 5.8510236E-4 46.666664 15 CCGTATT 30 5.8510236E-4 46.666664 14 CTCGCAT 30 5.8510236E-4 46.666664 22 >>END_MODULE