##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781203_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 83353 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.22410711072187 34.0 34.0 34.0 32.0 34.0 2 33.27502309454969 34.0 34.0 34.0 33.0 34.0 3 33.33728839993761 34.0 34.0 34.0 33.0 34.0 4 33.40837162429666 34.0 34.0 34.0 34.0 34.0 5 33.422228354108434 34.0 34.0 34.0 34.0 34.0 6 36.8251652609984 38.0 37.0 38.0 34.0 38.0 7 36.70587741293055 38.0 37.0 38.0 34.0 38.0 8 36.46184300505081 38.0 37.0 38.0 34.0 38.0 9 36.447818314877686 38.0 37.0 38.0 34.0 38.0 10-11 36.385553009489755 38.0 37.0 38.0 34.0 38.0 12-13 36.3274687173827 38.0 37.0 38.0 34.0 38.0 14-15 36.33424711768023 38.0 37.0 38.0 34.0 38.0 16-17 36.222307535421635 38.0 37.0 38.0 33.5 38.0 18-19 36.19575180257459 38.0 37.0 38.0 33.5 38.0 20-21 36.16614279030149 38.0 37.0 38.0 33.0 38.0 22-23 36.24301464854294 38.0 37.0 38.0 34.0 38.0 24-25 36.19398821878037 38.0 37.0 38.0 33.5 38.0 26-27 35.924987702902115 38.0 36.5 38.0 31.5 38.0 28-29 35.87195421880436 38.0 36.0 38.0 31.0 38.0 30-31 35.95200532674289 38.0 37.0 38.0 32.0 38.0 32-33 35.923626024258276 38.0 36.5 38.0 32.0 38.0 34-35 35.9445130949096 38.0 37.0 38.0 32.0 38.0 36-37 35.86276438760453 38.0 36.0 38.0 31.5 38.0 38-39 35.47583170371792 38.0 36.0 38.0 31.0 38.0 40-41 35.75005098796684 38.0 36.0 38.0 31.0 38.0 42-43 35.870196633594475 38.0 36.0 38.0 31.5 38.0 44-45 35.863532206399285 38.0 36.0 38.0 31.0 38.0 46-47 35.866729451849366 38.0 36.0 38.0 31.5 38.0 48-49 35.829256295514256 38.0 36.0 38.0 31.5 38.0 50-51 35.712601825969074 38.0 36.0 38.0 31.0 38.0 52-53 35.73054959029669 38.0 36.0 38.0 31.0 38.0 54-55 35.74698571137212 38.0 36.0 38.0 31.0 38.0 56-57 35.69672357323671 38.0 36.0 38.0 31.0 38.0 58-59 35.62713999496119 38.0 36.0 38.0 31.0 38.0 60-61 35.60240183316738 38.0 36.0 38.0 31.0 38.0 62-63 35.58430410423141 38.0 36.0 38.0 31.0 38.0 64-65 35.53832495531054 38.0 36.0 38.0 31.0 38.0 66-67 35.454590716590886 38.0 36.0 38.0 31.0 38.0 68-69 35.22934387484554 38.0 36.0 38.0 28.5 38.0 70-71 34.794758437008866 38.0 35.5 38.0 26.0 38.0 72-73 34.45634830180077 38.0 35.0 38.0 24.0 38.0 74-75 34.48731899271772 38.0 35.0 38.0 24.0 38.0 76 33.60414142262426 37.0 34.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 3.0 22 12.0 23 35.0 24 79.0 25 177.0 26 315.0 27 543.0 28 861.0 29 1362.0 30 2020.0 31 2931.0 32 3953.0 33 5321.0 34 7170.0 35 10083.0 36 13686.0 37 34800.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.16221371756265 17.159550346118316 8.823917555456912 30.854318380862118 2 21.918827156791 18.449245977949204 35.002939306323704 24.628987558936092 3 20.2704161817811 20.25242042877881 31.851283097189064 27.625880292251026 4 14.067879980324644 20.054467145753602 33.43011049392343 32.447542379998325 5 14.211846004342977 31.8656796995909 37.87626120235624 16.046213093709884 6 30.640768778568255 39.027989394502896 15.986227250368913 14.345014576559931 7 28.267728815999426 26.9696351661008 19.958489796408045 24.804146221491727 8 24.711768022746632 37.90025553969264 17.106762803978263 20.281213633582475 9 23.459263613787147 14.270632130817127 18.842753110265978 43.42735114512975 10-11 24.934315501541636 25.31282617302317 27.175386608760334 22.577471716674864 12-13 24.804146221491727 20.575144265953234 26.868858949287965 27.751850563267066 14-15 22.851007162309696 21.48632922630259 21.707077129797366 33.955586481590345 16-17 26.31758904898444 27.27016424123907 22.147373219920098 24.264873489856395 18-19 26.393171211594062 24.42803498374384 22.98417573452665 26.19461807013545 20-21 23.100548270608137 24.106510863436228 22.857605605077204 29.935335260878432 22-23 22.957781963456625 26.853862488452723 23.4934555444915 26.694900003599148 24-25 26.472352524804144 26.599522512687006 22.915791873117943 24.012333089390903 26-27 25.667342507168307 27.291759144841816 23.13294062601226 23.907957721977613 28-29 23.528247333629263 23.82817655033412 26.896452437224816 25.7471236788118 30-31 23.216920806689618 23.674612791381232 26.622916991589985 26.48554941033916 32-33 22.516286156467075 26.408167672429308 27.254567921970413 23.820978249133205 34-35 23.19412618622005 23.72500089978765 29.956930164481182 23.123942749511116 36-37 23.15813468021547 29.10093218000552 24.032728276126832 23.708204863652178 38-39 22.873801782779264 24.65538133000612 26.5803270428179 25.890489844396726 40-41 22.708840713591595 23.012369080896907 27.77464518373664 26.50414502177486 42-43 25.64994661259943 23.100548270608137 26.985231485369454 24.264273631422984 44-45 22.31233428910777 26.140630811128574 27.874821542116063 23.672213357647596 46-47 24.985303468381463 23.24691372836011 25.309826880856118 26.457955922402316 48-49 24.848535745564046 22.86480390627812 25.09747699542908 27.189183352728758 50-51 21.728672033400116 23.242714719326237 28.01818770770098 27.010425539572662 52-53 21.23918755173779 22.825813108106487 31.43498134440272 24.500017995753 54-55 20.98364785910525 23.420872674048923 28.578455484505653 27.017023982340167 56-57 24.06212133936391 23.1971254783871 25.379410459131645 27.361342723117343 58-59 21.307571413146498 23.143738077813637 30.67915971830648 24.86953079073339 60-61 24.248077453720924 26.083044401521242 25.041090302688566 24.62778784206927 62-63 20.351996928724823 29.88494715247202 24.657780763739755 25.105275155063406 64-65 20.71251184720406 29.93773469461207 24.360850839201948 24.98890261898192 66-67 20.700514678535868 30.041510203591955 23.924753758113084 25.333221359759094 68-69 20.64892685326263 30.499202188283565 23.666814631746906 25.185056326706896 70-71 21.05143186208055 28.27492711720034 24.63138699266973 26.042254028049385 72-73 21.454536729331878 25.82330569985483 25.650546471032836 27.07161109978045 74-75 20.950655645267716 25.970870874473622 26.114237040058548 26.96423644020011 76 20.86427603085672 25.918683190766977 26.25460391347642 26.962436864899885 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 0.5 11 0.0 12 0.0 13 0.5 14 1.5 15 6.5 16 21.0 17 31.0 18 48.0 19 72.5 20 86.0 21 92.0 22 128.0 23 209.5 24 291.5 25 328.0 26 393.5 27 498.5 28 574.5 29 611.0 30 697.5 31 928.5 32 1224.0 33 1375.0 34 1505.0 35 1773.0 36 2352.5 37 2794.0 38 3242.0 39 4234.5 40 4822.5 41 4647.5 42 4429.0 43 4405.0 44 4184.5 45 3873.5 46 3759.0 47 3762.0 48 3619.0 49 3337.0 50 3201.0 51 2974.0 52 2529.5 53 2280.5 54 2249.0 55 2167.0 56 1971.0 57 1737.5 58 1618.0 59 1507.0 60 1365.0 61 1302.0 62 1270.0 63 1190.5 64 1139.0 65 1136.5 66 1157.5 67 1209.0 68 1210.0 69 1163.0 70 1087.0 71 1059.0 72 1042.0 73 1014.0 74 961.5 75 920.0 76 855.5 77 710.5 78 561.5 79 493.0 80 441.0 81 326.0 82 231.5 83 200.0 84 164.5 85 98.5 86 48.5 87 29.0 88 21.0 89 10.5 90 6.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 83353.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.13546003143258 #Duplication Level Percentage of deduplicated Percentage of total 1 62.783924136373905 33.36052691564791 2 20.905396251975617 22.216356939762218 3 8.36531948521111 13.334852974697972 4 3.370964100248363 7.164709128645639 5 1.6459697448634003 4.372967979556824 6 0.8918491758862045 2.8433289743620507 7 0.5125310453827049 1.9063501013760753 8 0.4018965906525175 1.7083968183508693 9 0.2799729058478212 1.3388840233704846 >10 0.8241137954391511 5.919403020887071 >50 0.006773538044705351 0.2603385600998165 >100 0.009031384059607135 1.1709236620157644 >500 0.0 0.0 >1k 0.002257846014901784 4.402960901227311 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCCGT 3670 4.402960901227311 No Hit TCTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCCG 401 0.4810864635945916 No Hit CTCTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCC 278 0.3335212889758017 No Hit CTTATACACATCTCCGAGCCCACGAGACTCTTATTAACCTCGTATGCCGT 184 0.22074790349477522 No Hit CTTATACACATCTCCGAGCCCACGAGACTCTTATTAAACTCGTATGCCGT 113 0.13556800595059565 No Hit CTTATACACATCTCCGAGCCCACGAGACTCTTATTAAGCTCGTATGCCGT 85 0.1019759336796516 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0011997168668194307 0.0 2 0.0 0.0 0.0 0.0011997168668194307 0.0 3 0.0 0.0 0.0 0.0011997168668194307 0.0 4 0.0 0.0 0.0 0.004798867467277723 0.0 5 0.0 0.0 0.0 0.005998584334097153 0.0 6 0.0 0.0 0.0 0.008398018067736015 0.0 7 0.0 0.0 0.0 0.008398018067736015 0.0 8 0.0 0.0 0.0 0.008398018067736015 0.0 9 0.0 0.0 0.0 0.008398018067736015 0.0 10 0.0 0.0 0.0 0.010797451801374876 0.0 11 0.0 0.0 0.0 0.010797451801374876 0.0 12 0.0 0.0 0.0 0.010797451801374876 0.0 13 0.0 0.0 0.0 0.011997168668194306 0.0 14 0.0 0.0 0.0 0.011997168668194306 0.0 15 0.0 0.0 0.0 0.011997168668194306 0.0 16 0.0 0.0 0.0 0.011997168668194306 0.0 17 0.0 0.0 0.0 0.011997168668194306 0.0 18 0.0 0.0 0.0 0.011997168668194306 0.0 19 0.0 0.0 0.0 0.011997168668194306 0.0 20 0.0 0.0 0.0 0.011997168668194306 0.0 21 0.0 0.0 0.0 0.011997168668194306 0.0 22 0.0 0.0 0.0 0.011997168668194306 0.0 23 0.0 0.0 0.0 0.013196885535013737 0.0 24 0.0 0.0 0.0 0.013196885535013737 0.0 25 0.0 0.0 0.0 0.014396602401833167 0.0 26 0.0 0.0 0.0 0.015596319268652598 0.0 27 0.0 0.0 0.0 0.031192638537305195 0.0 28 0.0 0.0 0.0 0.06838386140870754 0.0 29 0.0 0.0 0.0 0.09237819874509616 0.0 30 0.0 0.0 0.0 0.12237112041558192 0.0 31 0.0 0.0 0.0 0.14396602401833167 0.0 32 0.0 0.0 0.0 0.17755809628927574 0.0 33 0.0 0.0 0.0 0.24234280709752498 0.0 34 0.0 0.0 0.0 0.328722421508524 0.0 35 0.0 0.0 0.0 0.4726884455268557 0.0 36 0.0 0.0 0.0 0.6670425779516034 0.0 37 0.0 0.0 0.0 1.0017635837942245 0.0 38 0.0 0.0 0.0 1.3364845896368458 0.0 39 0.0 0.0 0.0 1.6748047460799251 0.0 40 0.0 0.0 0.0 1.9711348121843244 0.0 41 0.0 0.0 0.0 2.284260914424196 0.0 42 0.0 0.0 0.0 2.6621717274723165 0.0 43 0.0 0.0 0.0 3.095269516394131 0.0 44 0.0 0.0 0.0 3.552361642652334 0.0 45 0.0 0.0 0.0 4.079037347186064 0.0 46 0.0 0.0 0.0 4.652502009525752 0.0 47 0.0 0.0 0.0 5.2631578947368425 0.0 48 0.0 0.0 0.0 5.7766367137355585 0.0 49 0.0 0.0 0.0 6.280517797799719 0.0 50 0.0 0.0 0.0 6.813192086667547 0.0 51 0.0 0.0 0.0 7.305076002063513 0.0 52 0.0 0.0 0.0 7.782563315057646 0.0 53 0.0 0.0 0.0 8.252852326850864 0.0 54 0.0 0.0 0.0 8.771130013316856 0.0 55 0.0 0.0 0.0 9.240219308243255 0.0 56 0.0 0.0 0.0 9.793288783847013 0.0 57 0.0 0.0 0.0 10.363154295586241 0.0 58 0.0 0.0 0.0 10.838242174846735 0.0 59 0.0 0.0 0.0 11.33492495770998 0.0 60 0.0 0.0 0.0 11.79681595143546 0.0 61 0.0 0.0 0.0 12.252708360826844 0.0 62 0.0 0.0 0.0 12.693004450949577 0.0 63 0.0 0.0 0.0 13.1452977097405 0.0 64 0.0 0.0 0.0 13.598790685398246 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAAGC 20 7.885622E-5 70.0 33 GCTCGTA 25 2.378149E-4 56.000004 38 TAAGCTC 25 2.378149E-4 56.000004 35 CGTATGC 555 0.0 53.603603 41 TCGTATG 555 0.0 53.603603 40 TATGCCG 550 0.0 53.454548 43 CCGTCTT 560 0.0 53.125 47 CTCGTAT 555 0.0 52.972973 39 CGGGTGG 20 0.0069295503 52.5 34 TCTAACT 20 0.0069295503 52.5 41 AATCTCG 500 0.0 52.5 36 CCAGTTT 20 0.0069295503 52.5 9 ATGCCGT 560 0.0 52.5 44 CTCTAAA 20 0.0069295503 52.5 61 CGTCTTC 565 0.0 52.035397 48 TGCCGTC 565 0.0 52.035397 45 TCTCGTA 505 0.0 51.980198 38 GCCGTCT 570 0.0 51.578945 46 GTATGCC 580 0.0 51.293106 42 CTTGAAA 555 0.0 51.081078 57 >>END_MODULE