SRR1781202_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781202_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	217617
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGGTC	20	0.0069445036	52.5	60
CTTGCGT	35	0.0012535271	40.0	49
CGATAGA	35	0.0012535271	40.0	37
TACGTAC	45	9.177328E-5	38.888885	10
CGTCCCA	55	6.6742195E-6	38.181816	50
CGTGCGA	40	0.0024151404	35.0	10
CTACGTA	50	1.7059395E-4	35.0	9
CGTAGCG	40	0.0024151404	35.0	15
TTGCGTG	40	0.0024151404	35.0	50
ATGCGAT	40	0.0024151404	35.0	26
TCGTCCC	65	2.0962394E-5	32.307693	49
GATGTAG	55	2.985543E-4	31.81818	1
CGGAATC	45	0.0043008635	31.111109	20
TTGGCAT	45	0.0043008635	31.111109	32
TGTTCGA	45	0.0043008635	31.111109	37
CGAATTC	45	0.0043008635	31.111109	41
ATTGCAC	45	0.0043008635	31.111109	32
CCGCAAG	45	0.0043008635	31.111109	11
TGCGTGA	45	0.0043008635	31.111109	51
CCCTAGT	60	4.971183E-4	29.166666	1