##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781202_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 217617 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29560650133032 34.0 32.0 34.0 23.0 34.0 2 31.379602696480514 34.0 33.0 34.0 23.0 34.0 3 31.364277606988423 34.0 33.0 34.0 23.0 34.0 4 31.525018725559125 34.0 33.0 34.0 23.0 34.0 5 31.467316432080214 34.0 33.0 34.0 23.0 34.0 6 34.34086950927547 37.0 34.0 38.0 25.0 38.0 7 34.17950343952908 37.0 34.0 38.0 24.0 38.0 8 34.008928530399736 37.0 34.0 38.0 24.0 38.0 9 34.33926577427315 37.0 34.0 38.0 24.0 38.0 10-11 34.18905232587528 37.0 34.0 38.0 24.0 38.0 12-13 34.17316891603138 37.0 34.0 38.0 24.0 38.0 14-15 34.043229619009544 37.0 34.0 38.0 23.5 38.0 16-17 34.026238758920485 37.0 34.0 38.0 23.5 38.0 18-19 34.07932744224946 37.0 34.0 38.0 23.5 38.0 20-21 34.017634192181674 37.0 34.0 38.0 23.5 38.0 22-23 34.0768276375467 37.0 34.0 38.0 23.5 38.0 24-25 34.071828028141184 37.0 34.0 38.0 23.5 38.0 26-27 33.98574789653382 37.0 34.0 38.0 23.0 38.0 28-29 34.0597195991122 37.0 34.0 38.0 23.5 38.0 30-31 34.15309465712697 37.0 34.0 38.0 24.0 38.0 32-33 34.09618274307614 37.0 34.0 38.0 23.5 38.0 34-35 34.13351438536512 37.0 34.0 38.0 24.0 38.0 36-37 33.98260016450921 37.0 34.0 38.0 23.5 38.0 38-39 33.99086698189939 37.0 34.0 38.0 23.0 38.0 40-41 33.98052082328127 37.0 34.0 38.0 23.5 38.0 42-43 34.052387910870934 37.0 34.0 38.0 24.0 38.0 44-45 34.085282859335436 37.0 34.0 38.0 24.0 38.0 46-47 34.06629307453002 37.0 34.0 38.0 24.0 38.0 48-49 34.05679473570539 37.0 34.0 38.0 24.0 38.0 50-51 33.9317332745144 37.0 34.0 38.0 23.0 38.0 52-53 34.0001401544916 37.0 34.0 38.0 23.5 38.0 54-55 33.961990561399155 37.0 34.0 38.0 23.0 38.0 56-57 33.93350473538372 37.0 34.0 38.0 23.5 38.0 58-59 33.95154101012329 37.0 34.0 38.0 23.0 38.0 60-61 33.915041104325496 37.0 34.0 38.0 23.0 38.0 62-63 33.90008822840127 37.0 34.0 38.0 23.0 38.0 64-65 33.9153765560595 37.0 34.0 38.0 23.0 38.0 66-67 33.82549616987643 37.0 34.0 38.0 23.0 38.0 68-69 33.58715541524789 37.0 34.0 38.0 22.5 38.0 70-71 33.74747836795838 37.0 34.0 38.0 23.0 38.0 72-73 33.703164274849854 37.0 34.0 38.0 23.0 38.0 74-75 33.698911390194695 37.0 34.0 38.0 23.0 38.0 76 32.39061286572281 37.0 31.0 38.0 21.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 24.0 14 108.0 15 286.0 16 673.0 17 1205.0 18 1595.0 19 1778.0 20 1771.0 21 1831.0 22 1979.0 23 2212.0 24 2665.0 25 3095.0 26 3676.0 27 4345.0 28 5182.0 29 6107.0 30 7145.0 31 8478.0 32 10199.0 33 12677.0 34 16056.0 35 21302.0 36 32125.0 37 71097.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.10898964694854 19.112936948859694 9.368293837338076 25.40977956685369 2 22.780389399725205 20.141349251207398 32.47494451260701 24.603316836460387 3 19.748916674708315 22.195876241286296 29.594654829356166 28.460552254649222 4 14.014530114834777 16.246892476231174 37.68179875653097 32.056778652403075 5 13.503540624124035 34.37093609414706 36.308744261707496 15.816779020021412 6 30.54462907139181 37.46829277259025 17.570399235350344 14.416678920667596 7 28.919615655026952 29.14156522698135 22.1081073629358 19.8307117550559 8 25.673545724828482 34.777154358345165 19.292150888947095 20.257149027879258 9 24.726928502828365 14.875676073100907 21.38435875873668 39.01303666533405 10-11 25.7036444763047 24.296355523695297 27.916477113460804 22.083522886539196 12-13 25.171804527689766 22.80066079548196 26.96394804621892 25.063586630609354 14-15 23.553361073264206 24.027589819705767 24.056769592379254 28.362279514650773 16-17 23.949415716603024 26.986862239622823 25.164624087272593 23.89909795650156 18-19 22.984647339132515 26.763993621821825 26.60591773620627 23.645441302839394 20-21 23.4021239149515 26.611202249824235 26.381440788173716 23.605233047050554 22-23 23.64917182290865 26.006300073753597 26.827699186412797 23.516828916924958 24-25 23.150764875905836 26.37799436624896 26.674616413239775 23.79662434460543 26-27 22.582794542705763 26.463235868521302 27.079685870129634 23.874283718643305 28-29 23.34123712761411 26.3508825137742 27.308758047395195 22.999122311216492 30-31 23.55537480987239 26.193725674005247 26.742625805888327 23.508273710234036 32-33 22.802446500043654 26.6633581016189 26.67668426639463 23.857511131942815 34-35 23.71138284233309 25.78475027226733 27.124948878074782 23.378918007324796 36-37 23.923222909974864 25.942596396421237 26.385346733021777 23.748833960582125 38-39 23.01934131984174 26.615108194672292 27.166076179710224 23.199474305775745 40-41 23.179255297150497 25.519605545522637 27.711070366745243 23.59006879058162 42-43 23.054265062012618 25.904455993787252 27.22627368266266 23.815005261537472 44-45 22.39416038269069 25.80634784966248 27.562414701057364 24.237077066589467 46-47 22.785903674804818 25.514550793366325 27.55368376551464 24.145861766314212 48-49 22.17956317750911 25.670099302903726 28.139805254185106 24.01053226540206 50-51 22.296562990398247 25.62604398104004 27.768115009661493 24.309278018900223 52-53 22.00999921881103 25.40403553031243 28.381973834764747 24.20399141611179 54-55 21.633879706089136 25.91203812202172 28.42746660417155 24.026615567717595 56-57 21.38997132563782 25.946162046908317 28.283076612013826 24.38079001544004 58-59 21.776202117491362 25.610708771413865 28.030108080288212 24.582981030806557 60-61 21.62892434379825 25.418397544298216 28.269290860966105 24.68338725093743 62-63 21.05888353797515 25.346711638850085 28.3912947577384 25.203110065436363 64-65 21.65236012057937 25.52179067715609 27.90442798323653 24.921421219028012 66-67 21.565509888978752 25.31086868612602 27.677192853466657 25.44642857142857 68-69 21.318285420189692 25.579001544004115 27.213532093228437 25.88918094257775 70-71 21.814112932872582 25.484109624292334 27.381948018528053 25.319829424307038 72-73 21.883960738181017 25.020448864054114 27.126222336592896 25.96936806117197 74-75 21.44051907947945 25.47698698625101 27.185960591133007 25.896533343136536 76 21.69050069847805 25.629089772810822 26.941952797588414 25.73845673112271 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 1.0 12 1.0 13 1.0 14 5.0 15 17.0 16 27.5 17 30.0 18 46.5 19 103.5 20 166.5 21 189.0 22 229.0 23 343.5 24 527.5 25 637.0 26 801.0 27 1086.5 28 1472.0 29 1736.0 30 2009.5 31 2545.5 32 3264.0 33 3720.0 34 4180.5 35 5152.0 36 6504.5 37 7346.0 38 7951.5 39 9476.0 40 11099.0 41 12452.5 42 13102.0 43 13236.0 44 13536.5 45 13729.5 46 13756.0 47 13368.5 48 12275.5 49 11180.0 50 10790.0 51 9837.5 52 8094.0 53 6886.5 54 6470.0 55 6069.5 56 5163.5 57 4263.5 58 3869.0 59 3449.5 60 2840.0 61 2476.0 62 2302.0 63 2179.0 64 1956.0 65 1837.0 66 1814.5 67 1811.0 68 1772.5 69 1644.0 70 1580.0 71 1606.0 72 1540.0 73 1394.5 74 1246.5 75 1178.0 76 1109.0 77 947.0 78 773.0 79 692.0 80 595.5 81 429.0 82 328.5 83 298.0 84 233.0 85 144.5 86 103.0 87 85.0 88 55.5 89 24.5 90 16.5 91 6.0 92 2.0 93 3.0 94 4.0 95 2.5 96 1.0 97 1.0 98 3.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 4.595229233010289E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 2.2976146165051446E-4 14-15 2.2976146165051446E-4 16-17 0.0 18-19 0.0 20-21 0.0 22-23 2.2976146165051446E-4 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 2.2976146165051446E-4 52-53 0.0 54-55 0.0 56-57 4.595229233010289E-4 58-59 4.595229233010289E-4 60-61 4.595229233010289E-4 62-63 4.595229233010289E-4 64-65 4.595229233010289E-4 66-67 4.595229233010289E-4 68-69 4.595229233010289E-4 70-71 4.595229233010289E-4 72-73 4.595229233010289E-4 74-75 4.595229233010289E-4 76 4.595229233010289E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 217617.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.31649569353007 #Duplication Level Percentage of deduplicated Percentage of total 1 70.40218698082916 34.015869640743304 2 14.825695186822072 14.326512752953564 3 5.773312267759226 8.368386519677792 4 2.3187235807084634 4.481303916071484 5 1.3176975835060585 3.183326480942273 6 0.8897439758429609 2.579358658629645 7 0.6383789438627923 2.159096344439081 8 0.5117003787163174 1.9778855315699724 9 0.4378878219084329 1.9041484555339259 >10 2.810860754909126 24.76308658178044 >50 0.07281505857951188 2.189457442908103 >100 9.974665558837243E-4 0.051567674750421975 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.190458466020577E-4 0.0 2 0.0 0.0 0.0 9.190458466020577E-4 0.0 3 0.0 0.0 0.0 9.190458466020577E-4 0.0 4 0.0 0.0 0.0 0.0013785687699030865 0.0 5 0.0 0.0 0.0 0.0013785687699030865 0.0 6 0.0 0.0 0.0 0.0013785687699030865 0.0 7 0.0 0.0 0.0 0.0013785687699030865 0.0 8 0.0 0.0 0.0 0.0013785687699030865 0.0 9 0.0 0.0 0.0 0.0013785687699030865 0.0 10 0.0 0.0 0.0 0.0018380916932041155 0.0 11 0.0 0.0 0.0 0.0018380916932041155 0.0 12 0.0 0.0 0.0 0.002757137539806173 0.0 13 0.0 0.0 0.0 0.002757137539806173 0.0 14 0.0 0.0 0.0 0.002757137539806173 0.0 15 0.0 0.0 0.0 0.002757137539806173 0.0 16 0.0 0.0 0.0 0.002757137539806173 0.0 17 0.0 0.0 0.0 0.002757137539806173 0.0 18 0.0 0.0 0.0 0.002757137539806173 0.0 19 0.0 0.0 0.0 0.002757137539806173 0.0 20 0.0 0.0 0.0 0.00413570630970926 0.0 21 0.0 0.0 0.0 0.004595229233010288 0.0 22 0.0 0.0 0.0 0.011488073082525722 0.0 23 0.0 0.0 0.0 0.011488073082525722 0.0 24 0.0 0.0 0.0 0.01194759600582675 0.0 25 0.0 0.0 0.0 0.013785687699030866 0.0 26 0.0 0.0 0.0 0.015623779392234981 0.0 27 0.0 0.0 0.0 0.022516623241750414 0.0 28 0.0 0.0 0.0 0.034923742170878194 0.0 29 0.0 0.0 0.0 0.04824990694660803 0.0 30 0.0 0.0 0.0 0.059737980029133754 0.0 31 0.0 0.0 0.0 0.07352366772816461 0.0 32 0.0 0.0 0.0 0.0923641075835068 0.0 33 0.0 0.0 0.0 0.13326164775729837 0.0 34 0.0 0.0 0.0 0.18656630686021772 0.0 35 0.0 0.0 0.0 0.270199478901005 0.0 36 0.0 0.0 0.0 0.4126515851243239 0.0 37 0.0 0.0 0.0 0.620355946456389 4.5952292330102886E-4 38 0.0 0.0 0.0 0.8413864725641839 4.5952292330102886E-4 39 0.0 0.0 0.0 1.1350216205535413 4.5952292330102886E-4 40 0.0 0.0 0.0 1.4258996310030927 4.5952292330102886E-4 41 0.0 0.0 0.0 1.7608918420895427 4.5952292330102886E-4 42 0.0 0.0 0.0 2.134024455809978 4.5952292330102886E-4 43 0.0 0.0 0.0 2.5668950495595473 4.5952292330102886E-4 44 0.0 0.0 0.0 3.053070302412036 4.5952292330102886E-4 45 0.0 0.0 0.0 3.633447754541235 4.5952292330102886E-4 46 0.0 0.0 0.0 4.22531327975296 4.5952292330102886E-4 47 0.0 0.0 0.0 4.882890582996732 4.5952292330102886E-4 48 0.0 0.0 0.0 5.473377539438555 4.5952292330102886E-4 49 0.0 0.0 0.0 6.090057302508535 4.5952292330102886E-4 50 0.0 0.0 0.0 6.610237251685301 4.5952292330102886E-4 51 0.0 0.0 0.0 7.137769567634882 4.5952292330102886E-4 52 0.0 0.0 0.0 7.6804661400533965 4.5952292330102886E-4 53 0.0 0.0 0.0 8.185941355684529 4.5952292330102886E-4 54 0.0 0.0 0.0 8.772752128739942 4.5952292330102886E-4 55 0.0 0.0 0.0 9.416543744284684 4.5952292330102886E-4 56 0.0 0.0 0.0 10.07090438706535 4.5952292330102886E-4 57 0.0 0.0 0.0 10.668743710279987 4.5952292330102886E-4 58 0.0 0.0 0.0 11.280828244116957 4.5952292330102886E-4 59 0.0 0.0 0.0 11.87131520055878 4.5952292330102886E-4 60 0.0 0.0 0.0 12.46593786331031 9.190458466020577E-4 61 0.0 0.0 0.0 13.006796344035623 9.190458466020577E-4 62 0.0 0.0 0.0 13.543519118451224 9.190458466020577E-4 63 0.0 0.0 0.0 14.119301341347413 9.190458466020577E-4 64 0.0 0.0 0.0 14.666133620075637 9.190458466020577E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGGTC 20 0.0069445036 52.5 60 CTTGCGT 35 0.0012535271 40.0 49 CGATAGA 35 0.0012535271 40.0 37 TACGTAC 45 9.177328E-5 38.888885 10 CGTCCCA 55 6.6742195E-6 38.181816 50 CGTGCGA 40 0.0024151404 35.0 10 CTACGTA 50 1.7059395E-4 35.0 9 CGTAGCG 40 0.0024151404 35.0 15 TTGCGTG 40 0.0024151404 35.0 50 ATGCGAT 40 0.0024151404 35.0 26 TCGTCCC 65 2.0962394E-5 32.307693 49 GATGTAG 55 2.985543E-4 31.81818 1 CGGAATC 45 0.0043008635 31.111109 20 TTGGCAT 45 0.0043008635 31.111109 32 TGTTCGA 45 0.0043008635 31.111109 37 CGAATTC 45 0.0043008635 31.111109 41 ATTGCAC 45 0.0043008635 31.111109 32 CCGCAAG 45 0.0043008635 31.111109 11 TGCGTGA 45 0.0043008635 31.111109 51 CCCTAGT 60 4.971183E-4 29.166666 1 >>END_MODULE