##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781202_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 196133 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.2802231139074 34.0 34.0 34.0 33.0 34.0 2 33.31107972651211 34.0 34.0 34.0 33.0 34.0 3 33.36517057302952 34.0 34.0 34.0 33.0 34.0 4 33.4333386018671 34.0 34.0 34.0 34.0 34.0 5 33.42326890426394 34.0 34.0 34.0 34.0 34.0 6 36.85967685193211 38.0 37.0 38.0 34.0 38.0 7 36.764878934192616 38.0 37.0 38.0 34.0 38.0 8 36.535830278433515 38.0 37.0 38.0 34.0 38.0 9 36.495648361061114 38.0 37.0 38.0 34.0 38.0 10-11 36.42222369514565 38.0 37.0 38.0 34.0 38.0 12-13 36.37600760708295 38.0 37.0 38.0 34.0 38.0 14-15 36.37801899731305 38.0 37.0 38.0 34.0 38.0 16-17 36.30719460774067 38.0 37.0 38.0 34.0 38.0 18-19 36.30554521676618 38.0 37.0 38.0 34.0 38.0 20-21 36.24810205319859 38.0 37.0 38.0 34.0 38.0 22-23 36.31250223062922 38.0 37.0 38.0 34.0 38.0 24-25 36.30004639708769 38.0 37.0 38.0 34.0 38.0 26-27 36.07286382199834 38.0 37.0 38.0 33.0 38.0 28-29 36.05649992607057 38.0 37.0 38.0 32.0 38.0 30-31 36.12462206767856 38.0 37.0 38.0 33.5 38.0 32-33 36.0534535238843 38.0 37.0 38.0 32.0 38.0 34-35 36.05861328792197 38.0 37.0 38.0 32.5 38.0 36-37 36.00973064196234 38.0 37.0 38.0 32.0 38.0 38-39 35.89433700601123 38.0 37.0 38.0 32.0 38.0 40-41 35.96878138813968 38.0 37.0 38.0 32.0 38.0 42-43 35.9891731631087 38.0 37.0 38.0 32.0 38.0 44-45 35.970183497932524 38.0 37.0 38.0 32.0 38.0 46-47 35.99080470904947 38.0 37.0 38.0 32.0 38.0 48-49 35.97473398153294 38.0 37.0 38.0 32.0 38.0 50-51 35.86825011599272 38.0 36.5 38.0 31.5 38.0 52-53 35.90366231077891 38.0 37.0 38.0 32.0 38.0 54-55 35.92745229002769 38.0 37.0 38.0 32.0 38.0 56-57 35.867673976332384 38.0 37.0 38.0 32.0 38.0 58-59 35.866162247046645 38.0 37.0 38.0 31.5 38.0 60-61 35.844750755864645 38.0 36.5 38.0 31.5 38.0 62-63 35.81916097749996 38.0 36.0 38.0 31.0 38.0 64-65 35.79887117415224 38.0 36.0 38.0 31.0 38.0 66-67 35.75264743821795 38.0 36.0 38.0 31.0 38.0 68-69 35.6686891038224 38.0 36.0 38.0 31.0 38.0 70-71 35.512466030703656 38.0 36.0 38.0 31.0 38.0 72-73 35.398155843228835 38.0 36.0 38.0 31.0 38.0 74-75 35.39548673604136 38.0 36.0 38.0 30.5 38.0 76 34.54611921502246 37.0 34.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 4.0 21 8.0 22 20.0 23 70.0 24 138.0 25 271.0 26 526.0 27 973.0 28 1654.0 29 2616.0 30 3968.0 31 5946.0 32 8291.0 33 11409.0 34 15815.0 35 22271.0 36 33147.0 37 89006.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.48579790244375 19.242044938893507 9.547602902112343 27.724554256550405 2 21.965706943757553 19.455675485512383 33.713857433476264 24.864760137253803 3 19.28997160090347 22.54337617840955 30.28047294437958 27.886179276307406 4 13.58924811225036 17.90672655799891 37.1446926320405 31.35933269771023 5 13.346555653561614 35.10526020608465 36.938200098912475 14.609984041441267 6 30.265687059291402 39.339121922369 16.93646658135041 13.458724436989186 7 28.143657620084326 29.171021704659594 21.821926957727662 20.86339371752841 8 24.950926157250436 36.67256402543172 18.356931266028663 20.01957855128918 9 23.97964646438896 14.547271494343125 20.517709921328894 40.95537211993902 10-11 24.67126898584124 25.35141969989752 28.034293056242447 21.943018258018792 12-13 24.29015005124074 22.770263035797136 27.146885021898402 25.792701891063718 14-15 22.681802654321302 23.80502006291649 23.316575996900063 30.196601285862144 16-17 24.179000984026146 27.825506161635218 24.311564091713276 23.68392876262536 18-19 24.045418160126037 26.43614282145279 25.399601290960728 24.11883772746045 20-21 22.471996043501093 26.22327706199365 25.321593000667914 25.983133893837344 22-23 22.92449511301005 26.85014760392183 25.684102114381567 24.541255168686554 24-25 23.83739605267854 27.07040630592506 25.61960506391071 23.472592577485685 26-27 23.18962132838431 27.46682098372023 25.925774856857338 23.41778283103812 28-29 22.908434582655644 25.90538053259778 27.578224979988068 23.607959904758506 30-31 24.052046315510395 25.854394721948882 26.915919299658903 23.17763966288182 32-33 23.535050195530584 26.398413321572605 25.93342272845467 24.13311375444214 34-35 23.10192573406821 25.496729260246877 27.121901974680444 24.279443031004472 36-37 22.84827132608995 26.68597329363238 26.77111959741604 23.694635782861628 38-39 22.285387976526135 26.542193307602496 27.410991521059692 23.761427194811684 40-41 22.456190442199937 25.035307673874364 28.009055079971247 24.49944680395446 42-43 23.58552614807299 25.237466413097238 27.281742491064737 23.89526494776504 44-45 21.811729795597884 26.83816593841934 27.661586780399016 23.688517485583763 46-47 23.104729953653898 25.384560476819303 26.91005593143428 24.600653638092517 48-49 22.597166208644133 25.18597074434185 27.27944812958554 24.93741491742848 50-51 21.547878225489846 25.197442551737854 28.32261781546196 24.932061407310346 52-53 20.99238781847012 25.124277913456684 29.847603411970447 24.035730856102745 54-55 20.564361938072633 25.50335741563123 28.753702844498374 25.178577801797758 56-57 21.74213416406214 25.339183105341785 27.474468855317564 25.44421387527851 58-59 20.764736173922795 25.294060662917513 29.253618717910808 24.687584445248888 60-61 21.53895570862629 26.22174748767418 27.25624958574029 24.983047217959243 62-63 19.97598568318437 27.544829274013043 27.239679197279397 25.23950584552319 64-65 20.499100100442046 27.873942681751668 26.42594565932301 25.201011558483273 66-67 20.507512759199116 27.727103547082848 26.07108441720669 25.694299276511344 68-69 19.9721617473857 28.212743393513584 25.949483258809074 25.865611600291636 70-71 20.797622021791334 27.305450893016474 26.15011242371248 25.74681466147971 72-73 20.930440058531712 25.747834377692687 26.36450775749109 26.95721780628451 74-75 20.72165316392448 26.0430422213498 26.36680211897029 26.86850249575543 76 21.40486302661969 25.743755512840778 26.25412347743623 26.5972579831033 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 4.0 15 12.0 16 28.0 17 40.0 18 60.5 19 104.0 20 151.0 21 175.0 22 226.0 23 382.5 24 588.5 25 689.0 26 804.0 27 983.5 28 1230.5 29 1413.0 30 1681.5 31 2141.5 32 2880.0 33 3427.0 34 3773.5 35 4551.5 36 5617.0 37 6251.0 38 6844.0 39 8297.5 40 10044.5 41 11653.0 42 12375.0 43 12724.5 44 12978.5 45 12726.5 46 12570.0 47 12328.0 48 11098.0 49 9757.0 50 9404.0 51 8598.0 52 7062.5 53 5981.0 54 5629.0 55 5327.5 56 4531.0 57 3652.5 58 3269.0 59 2889.0 60 2318.5 61 2102.5 62 2077.0 63 1959.0 64 1805.5 65 1745.0 66 1710.0 67 1700.0 68 1627.0 69 1512.5 70 1473.0 71 1475.0 72 1400.0 73 1264.0 74 1141.0 75 1079.0 76 1018.5 77 895.5 78 735.5 79 638.0 80 567.5 81 418.5 82 295.0 83 250.0 84 202.5 85 114.5 86 58.5 87 43.0 88 29.5 89 12.0 90 6.0 91 3.5 92 3.0 93 3.5 94 2.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 196133.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.54476809104026 #Duplication Level Percentage of deduplicated Percentage of total 1 61.85707448179375 25.69837814136326 2 19.24082323920327 15.987110787067959 3 7.534086864744793 9.390056747207252 4 3.079169888197538 5.1169359567232435 5 1.6629235546064824 3.4542886714627317 6 1.072616373967576 2.673695910428128 7 0.7584404108832518 2.205646168671259 8 0.6344881754476394 2.1087731284383557 9 0.5007179411656419 1.8721989670274763 >10 3.552888332535621 26.653852232923576 >50 0.09940723831964951 2.582431309366603 >100 0.006136249278990709 0.5593143428183937 >500 0.0 0.0 >1k 0.0012272498557981421 1.6973176365017617 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTGTGCCTTATCTCGTATGCCGT 3329 1.6973176365017617 No Hit TCTTATACACATCTCCGAGCCCACGAGACTGTGCCTTATCTCGTATGCCG 412 0.21006153987345322 No Hit CTCTTATACACATCTCCGAGCCCACGAGACTGTGCCTTATCTCGTATGCC 266 0.13562225632606445 No Hit CTTATACACATCTCCGAGCCCACGAGACTGTGCCTTACCTCGTATGCCGT 201 0.10248147940428178 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0010197162129779282 0.0 2 0.0 0.0 0.0 0.0010197162129779282 0.0 3 0.0 0.0 0.0 0.0010197162129779282 0.0 4 0.0 0.0 0.0 0.0015295743194668923 0.0 5 0.0 0.0 0.0 0.0015295743194668923 0.0 6 0.0 0.0 0.0 0.0015295743194668923 0.0 7 0.0 0.0 0.0 0.0015295743194668923 0.0 8 0.0 0.0 0.0 0.0015295743194668923 0.0 9 0.0 0.0 0.0 0.0015295743194668923 0.0 10 0.0 0.0 0.0 0.0020394324259558564 0.0 11 0.0 0.0 0.0 0.0020394324259558564 0.0 12 0.0 0.0 0.0 0.0030591486389337846 0.0 13 0.0 0.0 0.0 0.0030591486389337846 0.0 14 0.0 0.0 0.0 0.0030591486389337846 0.0 15 0.0 0.0 0.0 0.0030591486389337846 0.0 16 0.0 0.0 0.0 0.0030591486389337846 0.0 17 0.0 0.0 0.0 0.0030591486389337846 0.0 18 0.0 0.0 0.0 0.0030591486389337846 0.0 19 0.0 0.0 0.0 0.004078864851911713 0.0 20 0.0 0.0 0.0 0.0056084391713786055 0.0 21 0.0 0.0 0.0 0.006118297277867569 0.0 22 0.0 0.0 0.0 0.007647871597334462 0.0 23 0.0 0.0 0.0 0.007647871597334462 0.0 24 0.0 0.0 0.0 0.007647871597334462 0.0 25 0.0 0.0 0.0 0.009687304023290318 0.0 26 0.0 0.0 0.0 0.011726736449246175 0.0 27 0.0 0.0 0.0 0.019374608046580637 0.0 28 0.0 0.0 0.0 0.03314077692178267 0.0 29 0.0 0.0 0.0 0.048946378222940554 0.0 30 0.0 0.0 0.0 0.0596533984592088 0.0 31 0.0 0.0 0.0 0.07596885786685566 0.0 32 0.0 0.0 0.0 0.09789275644588111 0.0 33 0.0 0.0 0.0 0.14377998602988787 0.0 34 0.0 0.0 0.0 0.19986437774367394 0.0 35 0.0 0.0 0.0 0.2895994044857316 0.0 36 0.0 0.0 0.0 0.44663570128433255 0.0 37 0.0 0.0 0.0 0.6781112816303223 0.0 38 0.0 0.0 0.0 0.9121361525087568 0.0 39 0.0 0.0 0.0 1.223149597467025 0.0 40 0.0 0.0 0.0 1.5397714815966717 0.0 41 0.0 0.0 0.0 1.888514426435123 0.0 42 0.0 0.0 0.0 2.285693891390026 0.0 43 0.0 0.0 0.0 2.7532337750404063 0.0 44 0.0 0.0 0.0 3.2702298950202158 0.0 45 0.0 0.0 0.0 3.879510332274528 0.0 46 0.0 0.0 0.0 4.519892114024667 0.0 47 0.0 0.0 0.0 5.217887861808059 0.0 48 0.0 0.0 0.0 5.849092197641396 0.0 49 0.0 0.0 0.0 6.4787669591552675 0.0 50 0.0 0.0 0.0 7.030433430376326 0.0 51 0.0 0.0 0.0 7.587708340768764 0.0 52 0.0 0.0 0.0 8.159769136249382 0.0 53 0.0 0.0 0.0 8.69155114131737 0.0 54 0.0 0.0 0.0 9.293693565080838 0.0 55 0.0 0.0 0.0 9.953449954877557 0.0 56 0.0 0.0 0.0 10.63614995946628 0.0 57 0.0 0.0 0.0 11.27653174121642 0.0 58 0.0 0.0 0.0 11.909775509475713 0.0 59 0.0 0.0 0.0 12.530782683179272 0.0 60 0.0 0.0 0.0 13.144141985285495 0.0 61 0.0 0.0 0.0 13.72283093615047 0.0 62 0.0 0.0 0.0 14.285204427607797 0.0 63 0.0 0.0 0.0 14.886327135158286 0.0 64 0.0 0.0 0.0 15.45481892389348 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCGA 25 2.8322102E-6 70.00001 10 CGTTGAT 15 0.0022221464 70.0 35 CGAGAAT 20 7.912256E-5 70.0 14 TATGCCG 515 0.0 59.805824 43 CGTCTTC 500 0.0 59.5 48 CCGTCTT 500 0.0 59.5 47 CGTATGC 525 0.0 59.333332 41 GCCGTCT 505 0.0 58.910892 46 TCGTATG 535 0.0 58.878506 40 CTCGTAT 530 0.0 58.773586 39 ATCTCGT 475 0.0 56.73684 37 TCTCGTA 475 0.0 56.73684 38 ATGCCGT 535 0.0 56.261684 44 TACCTCG 50 9.749783E-10 56.000004 36 GTCTTCT 535 0.0 55.60748 49 CTTGAAA 510 0.0 55.588238 57 GTATGCC 555 0.0 55.495495 42 TCTTCTG 545 0.0 54.587154 50 TGCCGTC 545 0.0 54.587154 45 CCGCTAT 20 0.0069434852 52.5 28 >>END_MODULE