SRR1781198_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781198_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	247234
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGTA	25	2.3873545E-4	56.000004	33
GTCGCAG	20	0.0069456166	52.5	28
TTTCGGA	20	0.0069456166	52.5	25
CGAATTG	20	0.0069456166	52.5	47
CTCTTGA	40	4.5842964E-5	43.75	2
CTATCGT	35	0.0012538576	40.000004	32
ATTTCGG	35	0.0012538576	40.000004	48
CAGTCGC	45	9.180954E-5	38.88889	44
GTACCTA	40	0.0024157742	35.0	1
AATTTCG	40	0.0024157742	35.0	47
ACGTTTA	40	0.0024157742	35.0	26
CGACCCT	40	0.0024157742	35.0	10
GGTCTAT	40	0.0024157742	35.0	1
CTTACGT	40	0.0024157742	35.0	23
AATGCGG	45	0.0043019853	31.111113	42
GCTGTCG	45	0.0043019853	31.111113	54
AGGTGAC	45	0.0043019853	31.111113	7
GAATGCG	50	0.0071995957	28.000002	41
ATCGGTT	50	0.0071995957	28.000002	25
GACTATC	50	0.0071995957	28.000002	38