SRR1781195_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781195_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	231859
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCATG	20	0.0069450745	52.5	19
GATCATA	20	0.0069450745	52.5	1
ACAGTCG	30	5.8696436E-4	46.666664	41
TACCACG	30	5.8696436E-4	46.666664	20
ATCACGT	30	5.8696436E-4	46.666664	39
ATCGTAC	30	5.8696436E-4	46.666664	25
TACGAAC	30	5.8696436E-4	46.666664	28
CATCGTA	30	5.8696436E-4	46.666664	24
ACGAACG	40	4.58341E-5	43.75	29
CACGCTA	35	0.0012536967	40.0	23
CCGAAAT	35	0.0012536967	40.0	47
AACGCAC	45	9.179189E-5	38.88889	32
TACATGC	40	0.0024154654	35.0	2
TACGTTG	40	0.0024154654	35.0	46
GACTATC	50	1.7062832E-4	35.0	38
GTATAGA	65	2.096829E-5	32.307693	1
CGTATTG	55	2.9861426E-4	31.81818	43
CGCACTC	55	2.9861426E-4	31.81818	34
CTACTGA	45	0.004301439	31.111113	33
ACTGATC	45	0.004301439	31.111113	24