SRR1781194_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781194_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	113312
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTGCGC	20	0.006935955	52.5	66
AATGCGT	20	0.006935955	52.5	6
AAATGCG	20	0.006935955	52.5	5
CGTAGGG	35	0.0012509844	40.000004	10
GCGATGT	35	0.0012509844	40.000004	19
GCCTACG	35	0.0012509844	40.000004	1
GCGCGAT	40	0.0024102717	35.0	17
AACACGA	40	0.0024102717	35.0	26
TCTATAC	55	2.9765745E-4	31.81818	3
TTACTCC	45	0.004292246	31.111113	4
CGCGATG	45	0.004292246	31.111113	18
TATTCAC	45	0.004292246	31.111113	20
CGATGTA	45	0.004292246	31.111113	20
ACAAGCC	45	0.004292246	31.111113	4
AACAGAT	60	4.9563247E-4	29.166666	31
ACACCTC	85	3.9177357E-6	28.82353	6
CTATACT	85	3.9177357E-6	28.82353	4
CCTACCA	50	0.0071833953	28.000002	27
GGAGTTT	50	0.0071833953	28.000002	68
TAGATGT	50	0.0071833953	28.000002	4