SRR1781194_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781194_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106369
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCCGT	545	0.5123673250665137	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACTTCG	15	0.002219342	70.0	59
GATCTCG	70	0.0	55.0	36
CTCGTAT	90	0.0	54.444447	39
GCGAAGT	20	0.00693479	52.5	32
GGTTATC	20	0.00693479	52.5	7
CGTATGC	100	0.0	52.499996	41
CGTCTTC	100	0.0	52.499996	48
TATGCCG	100	0.0	52.499996	43
TCGTATG	100	0.0	52.499996	40
TCTCGTA	75	0.0	51.333336	38
ATGCCGT	100	0.0	48.999996	44
ATCTCGT	80	0.0	48.125	37
CCGTCTT	110	0.0	47.727276	47
GTATGCC	115	0.0	45.652176	42
TGCCGTC	110	0.0	44.545456	45
GCCGTCT	120	0.0	40.833332	46
AGATCTC	95	3.6379788E-12	40.526318	35
TACAGAT	110	0.0	38.18182	32
CTTGAAA	120	0.0	37.916664	57
TCTTCTG	135	0.0	36.296295	50