##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781193_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 116698 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.285429056196335 34.0 34.0 34.0 31.0 34.0 2 32.26009871634475 34.0 34.0 34.0 27.0 34.0 3 32.24733928602033 34.0 34.0 34.0 27.0 34.0 4 32.36921798145641 34.0 34.0 34.0 31.0 34.0 5 32.356715624946446 34.0 34.0 34.0 31.0 34.0 6 35.45214142487446 38.0 36.0 38.0 31.0 38.0 7 35.32108519426211 38.0 36.0 38.0 28.0 38.0 8 35.23561672008089 38.0 36.0 38.0 27.0 38.0 9 35.53736996349552 38.0 37.0 38.0 31.0 38.0 10-11 35.42872200037704 38.0 36.0 38.0 31.0 38.0 12-13 35.377962775711666 38.0 36.0 38.0 31.0 38.0 14-15 35.315836603883525 38.0 36.0 38.0 29.5 38.0 16-17 35.284503590464276 38.0 36.0 38.0 29.0 38.0 18-19 35.315382440144646 38.0 36.0 38.0 29.5 38.0 20-21 35.27912646317846 38.0 36.0 38.0 29.0 38.0 22-23 35.31809885345079 38.0 36.0 38.0 29.0 38.0 24-25 35.300356475689384 38.0 36.0 38.0 29.0 38.0 26-27 35.22904848412141 38.0 36.0 38.0 27.0 38.0 28-29 35.30951258804778 38.0 36.0 38.0 29.5 38.0 30-31 35.382320176866784 38.0 36.0 38.0 31.0 38.0 32-33 35.3424223208624 38.0 36.0 38.0 29.0 38.0 34-35 35.37032339885859 38.0 36.0 38.0 31.0 38.0 36-37 35.2528063891412 38.0 36.0 38.0 28.5 38.0 38-39 35.25841488286003 38.0 36.0 38.0 27.0 38.0 40-41 35.25276782806903 38.0 36.0 38.0 28.0 38.0 42-43 35.328990214056795 38.0 36.0 38.0 30.5 38.0 44-45 35.338651904916965 38.0 36.0 38.0 30.0 38.0 46-47 35.31333013419253 38.0 36.0 38.0 29.0 38.0 48-49 35.27002605014653 38.0 36.0 38.0 28.0 38.0 50-51 35.16858472296012 38.0 36.0 38.0 27.0 38.0 52-53 35.23768616428731 38.0 36.0 38.0 27.0 38.0 54-55 35.205290579101614 38.0 36.0 38.0 27.0 38.0 56-57 35.163289002382214 38.0 36.0 38.0 27.0 38.0 58-59 35.17660542597131 38.0 36.0 38.0 27.0 38.0 60-61 35.15531114500677 38.0 36.0 38.0 27.0 38.0 62-63 35.11624020977223 38.0 36.0 38.0 27.0 38.0 64-65 35.11522905276868 38.0 36.0 38.0 27.0 38.0 66-67 35.017943752249394 38.0 36.0 38.0 27.0 38.0 68-69 34.74143515741486 38.0 35.5 38.0 26.0 38.0 70-71 34.90408147526093 38.0 36.0 38.0 27.0 38.0 72-73 34.88103909235805 38.0 36.0 38.0 27.0 38.0 74-75 34.89685341651099 38.0 36.0 38.0 27.0 38.0 76 33.56596514079076 37.0 34.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 10.0 14 50.0 15 140.0 16 280.0 17 473.0 18 626.0 19 609.0 20 536.0 21 581.0 22 556.0 23 625.0 24 705.0 25 795.0 26 1050.0 27 1270.0 28 1587.0 29 1851.0 30 2364.0 31 3008.0 32 4043.0 33 5393.0 34 7615.0 35 11351.0 36 20312.0 37 50866.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 44.78225847915132 20.674733071689317 9.175821350837204 25.367187098322162 2 22.46310990762481 19.74241203790982 29.905396836278257 27.889081218187115 3 18.615571817854633 21.942106976983325 28.457214348146497 30.985106857015545 4 13.938542220089461 17.115974566830623 35.74954155169755 33.19594166138237 5 13.934257656515106 33.86004901540729 35.33136814684056 16.87432518123704 6 29.777716841762498 37.07175787074329 18.131416133952598 15.01910915354162 7 28.243843082143655 29.128177003890382 22.161476631990265 20.466503281975697 8 24.96700886047747 33.97915988277434 19.90436854102041 21.149462715727775 9 24.075819637011776 15.98313595777134 21.050060840802757 38.89098356441413 10-11 25.157671939536243 24.329037344256115 27.503042040137792 23.010248676069857 12-13 25.073694493478893 22.729181305592213 26.12726867641262 26.06985552451627 14-15 23.100652967488735 24.032545544910796 23.815318171691032 29.051483315909444 16-17 23.571526504310274 26.594714562374676 25.056984695538915 24.776774237776138 18-19 22.796448953709575 26.441327186412796 26.167543574011553 24.594680285866083 20-21 22.74803338531937 26.350065982279048 26.16540129222437 24.73649934017721 22-23 23.315309602563882 25.97173901866356 26.43575725376613 24.277194125006428 24-25 22.822584791513137 26.545442081269606 26.18553874102384 24.44643438619342 26-27 22.154192873913864 26.561723422852147 26.674407444857668 24.60967625837632 28-29 22.779310699412157 26.24937873828172 27.192411180997105 23.77889938130902 30-31 23.014104783286772 26.390769336235408 26.32907162076471 24.266054259713105 32-33 22.543659702822673 26.775523145212425 26.518020874393734 24.162796277571168 34-35 23.203482493273235 25.695384668117704 26.920341394025606 24.180791444583456 36-37 23.233902894651152 25.6469690997275 26.411763697749745 24.7073643078716 38-39 22.586505338566212 26.3809148400144 27.038166892320348 23.99441292909904 40-41 22.691477146137895 25.632401583574698 27.317948893725685 24.358172376561722 42-43 22.399698366724365 25.87705016367033 26.842362336972357 24.880889132632948 44-45 22.083069118579584 25.92118116848618 27.02659857066959 24.969151142264646 46-47 22.518809234091417 25.242077841951016 27.18555587927814 25.05355704467943 48-49 22.230029649179933 25.186806971841847 27.685564448405287 24.897598930572933 50-51 21.867127114432126 25.26564294160997 27.55659908481722 25.310630859140687 52-53 21.844418927488046 24.95586899518415 28.04803852679566 25.151673550532145 54-55 21.169171708169806 25.45801984609848 28.07246053916948 25.300347906562237 56-57 20.823835884076846 25.538569641296338 28.087028055322282 25.55056641930453 58-59 21.05048929716019 25.54371111758556 27.91393168691837 25.491867898335872 60-61 20.87610755968397 25.298634081132498 27.810245248418997 26.01501311076454 62-63 20.36881523248042 24.993144698281032 28.445217570138304 26.192822499100245 64-65 21.21201734391335 25.052271675607123 27.677852233971446 26.057858746508078 66-67 21.083051980325283 24.893742823356014 27.402354796140465 26.620850400178238 68-69 21.086051174827332 24.802481619222267 27.09129548064234 27.02017172530806 70-71 21.928396373545393 24.769490479699737 26.785377641433445 26.516735505321424 72-73 22.540232051963187 23.96356407136369 26.22024370597611 27.27596017069701 74-75 22.580078493204685 24.24763063634338 25.948173919004606 27.224116951447325 76 23.180345849971722 23.66535844658863 26.016726936194278 27.13756876724537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 3.0 15 6.0 16 10.5 17 15.0 18 22.5 19 35.0 20 40.5 21 41.0 22 59.5 23 117.5 24 216.5 25 276.0 26 342.5 27 451.0 28 587.5 29 682.0 30 822.5 31 1056.0 32 1476.0 33 1803.0 34 2070.0 35 2624.0 36 3370.5 37 3830.0 38 4194.0 39 5100.0 40 6119.0 41 6824.0 42 7052.0 43 7241.5 44 7507.5 45 7439.0 46 7294.0 47 7268.5 48 6732.5 49 5939.5 50 5657.0 51 5339.5 52 4438.5 53 3554.5 54 3254.0 55 3022.0 56 2568.5 57 2089.5 58 1832.0 59 1632.0 60 1358.0 61 1213.0 62 1142.0 63 1135.5 64 1082.5 65 1076.0 66 1125.0 67 1134.0 68 1140.0 69 1114.0 70 1065.5 71 1049.0 72 1046.5 73 973.5 74 862.0 75 821.0 76 770.0 77 651.0 78 509.5 79 436.0 80 387.5 81 291.5 82 208.5 83 173.0 84 141.5 85 89.5 86 55.0 87 41.0 88 33.0 89 17.5 90 8.0 91 7.5 92 9.0 93 6.5 94 3.0 95 1.0 96 0.0 97 1.5 98 2.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 116698.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.508149239918424 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97994638797462 35.8506572520523 2 13.769468290862202 13.90940718778385 3 5.227172474636083 7.920444223551389 4 2.507549794713447 5.066067970316544 5 1.6355060907332635 4.130319285677561 6 1.1825184079264361 3.5836089735899503 7 0.9042787825319806 3.197141339183191 8 0.6311289063825456 2.550172239455689 9 0.4954022598486648 2.2519666146806285 >10 2.6551525228190425 21.158031842876486 >50 0.011876081571714566 0.382183070832405 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.569127148708633E-4 0.0 5 0.0 0.0 0.0 8.569127148708633E-4 0.0 6 0.0 0.0 0.0 8.569127148708633E-4 0.0 7 0.0 0.0 0.0 0.0017138254297417266 0.0 8 0.0 0.0 0.0 0.0017138254297417266 0.0 9 0.0 0.0 0.0 0.0017138254297417266 0.0 10 0.0 0.0 0.0 0.0017138254297417266 0.0 11 0.0 0.0 0.0 0.0017138254297417266 0.0 12 0.0 0.0 0.0 0.0017138254297417266 0.0 13 0.0 0.0 0.0 0.0017138254297417266 0.0 14 0.0 0.0 0.0 0.0017138254297417266 0.0 15 0.0 0.0 0.0 0.0017138254297417266 0.0 16 0.0 0.0 0.0 0.0017138254297417266 0.0 17 0.0 0.0 0.0 0.0017138254297417266 0.0 18 0.0 0.0 0.0 0.0017138254297417266 0.0 19 0.0 0.0 0.0 0.0025707381446125896 0.0 20 0.0 0.0 0.0 0.003427650859483453 0.0 21 0.0 0.0 0.0 0.005141476289225179 0.0 22 0.0 0.0 0.0 0.007712214433837769 0.0 23 0.0 0.0 0.0 0.007712214433837769 0.0 24 0.0 0.0 0.0 0.008569127148708633 0.0 25 0.0 0.0 0.0 0.008569127148708633 0.0 26 0.0 0.0 0.0 0.008569127148708633 0.0 27 0.0 0.0 0.0 0.011996778008192086 0.0 28 0.0 0.0 0.0 0.02399355601638417 0.0 29 0.0 0.0 0.0 0.03427650859483453 0.0 30 0.0 0.0 0.0 0.04884402474763921 0.0 31 0.0 0.0 0.0 0.06084080275583129 0.0 32 0.0 0.0 0.0 0.08054979519786115 0.0 33 0.0 0.0 0.0 0.10111570035476186 0.0 34 0.0 0.0 0.0 0.14139059795369244 0.0 35 0.0 0.0 0.0 0.19537609899055683 0.0 36 0.0 0.0 0.0 0.3230560935063154 0.0 37 0.0 0.0 0.0 0.4970093746251007 0.0 38 0.0 0.0 0.0 0.7249481567807503 0.0 39 0.0 0.0 0.0 0.983735796671751 0.0 40 0.0 0.0 0.0 1.2690877307237485 0.0 41 0.0 0.0 0.0 1.5989991259490308 0.0 42 0.0 0.0 0.0 1.9811821967814358 0.0 43 0.0 0.0 0.0 2.494472912989083 0.0 44 0.0 0.0 0.0 3.040326312361823 0.0 45 0.0 0.0 0.0 3.7361394368369636 0.0 46 0.0 0.0 0.0 4.5390666506709625 0.0 47 0.0 0.0 0.0 5.32057104663319 0.0 48 0.0 0.0 0.0 6.052374505132907 0.0 49 0.0 0.0 0.0 6.83987729009923 0.0 50 0.0 0.0 0.0 7.5245505492810505 0.0 51 0.0 0.0 0.0 8.225505150045416 0.0 52 0.0 0.0 0.0 8.901609282078528 0.0 53 0.0 0.0 0.0 9.603420795557765 0.0 54 0.0 0.0 0.0 10.34293646849132 0.0 55 0.0 0.0 0.0 11.133866904317125 0.0 56 0.0 0.0 0.0 11.909372911275257 0.0 57 0.0 0.0 0.0 12.69516187081184 0.0 58 0.0 0.0 0.0 13.454386536187425 0.0 59 0.0 0.0 0.0 14.151056573377435 0.0 60 0.0 0.0 0.0 14.927419493050438 0.0 61 0.0 0.0 0.0 15.652367649831188 0.0 62 0.0 0.0 0.0 16.423589093214964 0.0 63 0.0 0.0 0.0 17.090267185384498 0.0 64 0.0 0.0 0.0 17.791221786148864 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 15 0.0022198823 70.00001 13 CCGTATG 15 0.0022198823 70.00001 12 ACCGTAT 30 8.333178E-6 58.333336 11 CTTGAGT 25 2.3821107E-4 56.000004 12 AAGCGCG 20 0.0069364663 52.5 7 ATGTTAC 20 0.0069364663 52.5 24 TAGCTCG 20 0.0069364663 52.5 10 ATAGTGC 30 5.857584E-4 46.666668 6 CTGAGAC 35 0.0012511369 40.0 28 GCTTGAG 35 0.0012511369 40.0 11 ACTAAAT 35 0.0012511369 40.0 1 TAGTGCT 35 0.0012511369 40.0 7 CTATGGC 40 0.0024105627 35.0 49 TACGAAT 40 0.0024105627 35.0 38 TACTTTT 55 2.9771109E-4 31.818184 25 CTTGCCA 55 2.9771109E-4 31.818184 70 GAGTGGA 45 0.0042927624 31.111109 15 GGTAAAC 45 0.0042927624 31.111109 35 GTGGGGC 45 0.0042927624 31.111109 39 TCTAGTA 45 0.0042927624 31.111109 3 >>END_MODULE