##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781185_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 133751 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30365380445754 34.0 34.0 34.0 31.0 34.0 2 32.43948082631158 34.0 34.0 34.0 31.0 34.0 3 32.46140215774088 34.0 34.0 34.0 31.0 34.0 4 32.563113546814606 34.0 34.0 34.0 31.0 34.0 5 32.50490837451682 34.0 34.0 34.0 31.0 34.0 6 35.68341918938924 38.0 37.0 38.0 31.0 38.0 7 35.66143056874341 38.0 37.0 38.0 31.0 38.0 8 35.513626066347165 38.0 37.0 38.0 31.0 38.0 9 35.738910363287005 38.0 37.0 38.0 31.0 38.0 10-11 35.660021233486106 38.0 37.0 38.0 31.0 38.0 12-13 35.619520601715124 38.0 37.0 38.0 31.0 38.0 14-15 35.542481925368776 38.0 36.5 38.0 31.0 38.0 16-17 35.52103161845519 38.0 36.5 38.0 31.0 38.0 18-19 35.53558478067454 38.0 37.0 38.0 31.0 38.0 20-21 35.49998504684077 38.0 36.5 38.0 31.0 38.0 22-23 35.53133808345358 38.0 36.5 38.0 31.0 38.0 24-25 35.53500534575443 38.0 36.5 38.0 31.0 38.0 26-27 35.46938340647921 38.0 36.0 38.0 31.0 38.0 28-29 35.54763328872308 38.0 37.0 38.0 31.0 38.0 30-31 35.58597692727531 38.0 37.0 38.0 31.0 38.0 32-33 35.551008964418955 38.0 37.0 38.0 31.0 38.0 34-35 35.563278031566114 38.0 37.0 38.0 31.0 38.0 36-37 35.476194570507886 38.0 36.5 38.0 31.0 38.0 38-39 35.46407129666321 38.0 36.0 38.0 31.0 38.0 40-41 35.46316289224006 38.0 36.0 38.0 31.0 38.0 42-43 35.54677348206742 38.0 37.0 38.0 31.0 38.0 44-45 35.5592631083132 38.0 37.0 38.0 31.0 38.0 46-47 35.540545491248665 38.0 36.5 38.0 31.0 38.0 48-49 35.50176447278899 38.0 36.5 38.0 31.0 38.0 50-51 35.4141838191864 38.0 36.0 38.0 31.0 38.0 52-53 35.47545812741587 38.0 36.0 38.0 31.0 38.0 54-55 35.42947716278756 38.0 36.0 38.0 31.0 38.0 56-57 35.39500265418576 38.0 36.0 38.0 30.5 38.0 58-59 35.402853062780835 38.0 36.0 38.0 31.0 38.0 60-61 35.386064403256796 38.0 36.0 38.0 31.0 38.0 62-63 35.34723104873982 38.0 36.0 38.0 29.5 38.0 64-65 35.35607958071341 38.0 36.0 38.0 30.0 38.0 66-67 35.25637565326615 38.0 36.0 38.0 27.5 38.0 68-69 34.98266928845392 38.0 36.0 38.0 27.0 38.0 70-71 35.12947940576145 38.0 36.0 38.0 27.0 38.0 72-73 35.14190174279071 38.0 36.0 38.0 27.0 38.0 74-75 35.16876135505529 38.0 36.0 38.0 27.0 38.0 76 33.90480071177038 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 10.0 14 60.0 15 166.0 16 303.0 17 433.0 18 580.0 19 613.0 20 574.0 21 537.0 22 576.0 23 651.0 24 758.0 25 908.0 26 1044.0 27 1388.0 28 1549.0 29 1997.0 30 2427.0 31 3190.0 32 4142.0 33 5534.0 34 8008.0 35 12575.0 36 22783.0 37 62943.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.57649662432431 19.171445447136843 9.846655352109517 27.40540257642933 2 22.543382853212314 19.128081285373565 32.4020007327048 25.926535128709315 3 19.169202473252536 21.671613670178168 27.97137965323624 31.18780420333306 4 13.715785302539793 15.882498074780749 35.745527136245705 34.656189486433746 5 13.77559793945466 33.83077509700862 35.35225904853048 17.04136791500624 6 30.24126922415533 36.463278779224076 17.879492489775778 15.415959506844809 7 29.510807395832554 28.271938153733426 21.91684548152911 20.300408968904907 8 25.845040410912816 33.51526343728271 19.470508631711166 21.169187520093306 9 23.909353948755523 15.28736233747785 21.07273964306809 39.730544070698535 10-11 25.22186750005607 23.942998557020132 27.156058646290493 23.679075296633297 12-13 24.85215063812607 22.731792659494136 26.323915335212444 26.092141367167347 14-15 23.193097621700023 23.624122436467765 23.30449865795396 29.87828128387825 16-17 23.72169180043514 26.344102100171213 24.881683127602784 25.052522971790864 18-19 23.110855245942087 26.411765145681155 25.74410658611898 24.733273022257777 20-21 22.774409163295974 26.529521274607294 25.76877929884636 24.927290263250367 22-23 23.215901189523816 25.99681497708428 26.22709362920651 24.56019020418539 24-25 22.99982803866887 26.379989682320133 25.845414239893532 24.774768039117465 26-27 22.083199377948574 26.510829825571395 26.315317268655935 25.09065352782409 28-29 22.852913249246733 26.06672099647853 27.025592332019947 24.054773422254787 30-31 22.954220903021287 26.272700764854097 26.167280992291648 24.605797339832975 32-33 22.543382853212314 26.601670267885847 25.929151931574346 24.925794947327496 34-35 23.444684525723172 25.58560309829459 26.5212970370315 24.44841533895074 36-37 23.431974340378765 25.84653572683569 25.77775119438359 24.943738738401954 38-39 22.575158316573336 26.27157927791194 26.658866101935686 24.494396303579038 40-41 22.972538523076462 25.55532295085644 26.665595023588608 24.806543502478487 42-43 22.770297044508077 25.739246809369646 26.471577782596018 25.018878363526255 44-45 22.29590806797706 25.783358629094362 26.595315175213642 25.325418127714933 46-47 22.47646746566381 25.259624227108585 27.061853743149584 25.202054564078026 48-49 22.014414845496482 25.414389425125794 27.494373873840196 25.076821855537528 50-51 21.98263938213546 25.26336251691576 27.36801967835755 25.385978422591233 52-53 21.87422897772727 24.89476714192791 27.82670783769841 25.40429604264641 54-55 21.371055169680975 25.475323548982807 27.604653423151976 25.54896785818424 56-57 20.980777713811484 25.754199968598368 27.594560040672594 25.670462276917554 58-59 21.493671075356445 25.641303616421556 27.209516190533158 25.65550911768884 60-61 21.020403585767582 25.158316573334034 27.52203721841332 26.299242622485064 62-63 20.797601513259714 25.077569513498965 27.90072597588055 26.224102997360767 64-65 21.505259773758702 25.151587651681105 27.291010908329653 26.052141666230533 66-67 21.372550485603846 24.886916733332836 27.12989061764024 26.610642163423076 68-69 21.339279706319953 24.824861122533665 26.88092051648212 26.95493865466426 70-71 22.23235714125502 24.762431682753775 26.537745512183086 26.46746566380812 72-73 22.498523375526165 24.183744420602462 26.295130503697166 27.022601700174203 74-75 22.56170047326749 24.586358232835643 26.01214196529372 26.839799328603153 76 23.179639778394183 24.113464572227496 25.611023468983408 27.095872180394913 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 0.5 11 1.0 12 2.0 13 3.5 14 2.5 15 10.0 16 20.5 17 21.0 18 29.0 19 54.5 20 86.5 21 101.0 22 125.0 23 196.5 24 309.0 25 374.0 26 466.5 27 608.5 28 821.0 29 984.0 30 1132.0 31 1445.5 32 1966.5 33 2322.0 34 2523.5 35 3080.0 36 3867.5 37 4300.0 38 4755.5 39 5812.0 40 6938.5 41 7597.0 42 7730.0 43 7844.0 44 8034.5 45 8006.0 46 7901.0 47 7790.5 48 7244.5 49 6540.5 50 6272.0 51 5753.5 52 4674.0 53 3845.5 54 3578.0 55 3309.5 56 2756.0 57 2233.0 58 1995.0 59 1865.0 60 1636.5 61 1496.0 62 1454.0 63 1439.0 64 1423.5 65 1435.0 66 1510.0 67 1573.0 68 1569.0 69 1552.5 70 1480.0 71 1420.0 72 1409.0 73 1343.5 74 1213.0 75 1137.0 76 1066.5 77 902.0 78 686.5 79 565.0 80 540.5 81 429.0 82 299.0 83 256.0 84 222.5 85 148.5 86 83.5 87 59.0 88 46.0 89 28.0 90 19.5 91 12.0 92 8.0 93 6.0 94 2.0 95 0.5 96 1.0 97 0.5 98 0.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 133751.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.35625901862416 #Duplication Level Percentage of deduplicated Percentage of total 1 70.55766718137546 35.5302016433522 2 14.743437462881579 14.848487114115036 3 5.202518113790236 7.859380490613155 4 2.4958427366670626 5.0272521326943345 5 1.5055232212851881 3.790625864479518 6 1.018529516569664 3.0773601692697627 7 0.7587005582610762 2.674372528055865 8 0.5582610761373085 2.2489551479988936 9 0.49144791542938593 2.227273067117255 >10 2.63689274260601 21.76058496758903 >50 0.031179474997030526 0.9555068747149554 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.476579614358024E-4 0.0 2 0.0 0.0 0.0 7.476579614358024E-4 0.0 3 0.0 0.0 0.0 7.476579614358024E-4 0.0 4 0.0 0.0 0.0 7.476579614358024E-4 0.0 5 0.0 0.0 0.0 7.476579614358024E-4 0.0 6 0.0 0.0 0.0 7.476579614358024E-4 0.0 7 0.0 0.0 0.0 7.476579614358024E-4 0.0 8 0.0 0.0 0.0 7.476579614358024E-4 0.0 9 0.0 0.0 0.0 7.476579614358024E-4 0.0 10 0.0 0.0 0.0 7.476579614358024E-4 0.0 11 0.0 0.0 0.0 7.476579614358024E-4 0.0 12 0.0 0.0 0.0 7.476579614358024E-4 0.0 13 0.0 0.0 0.0 7.476579614358024E-4 0.0 14 0.0 0.0 0.0 7.476579614358024E-4 0.0 15 0.0 0.0 0.0 7.476579614358024E-4 0.0 16 0.0 0.0 0.0 7.476579614358024E-4 0.0 17 0.0 0.0 0.0 7.476579614358024E-4 0.0 18 0.0 0.0 0.0 0.0014953159228716048 0.0 19 0.0 0.0 0.0 0.0014953159228716048 0.0 20 0.0 0.0 0.0 0.0014953159228716048 0.0 21 0.0 0.0 0.0 0.002242973884307407 0.0 22 0.0 0.0 0.0 0.0037382898071790117 0.0 23 0.0 0.0 0.0 0.004485947768614814 0.0 24 0.0 0.0 0.0 0.004485947768614814 0.0 25 0.0 0.0 0.0 0.004485947768614814 0.0 26 0.0 0.0 0.0 0.005233605730050617 0.0 27 0.0 0.0 0.0 0.00971955349866543 0.0 28 0.0 0.0 0.0 0.02317739680450987 0.0 29 0.0 0.0 0.0 0.0321492923417395 0.0 30 0.0 0.0 0.0 0.04485947768614814 0.0 31 0.0 0.0 0.0 0.05756966303055678 0.0 32 0.0 0.0 0.0 0.07401813818214444 0.0 33 0.0 0.0 0.0 0.0957002190637827 0.0 34 0.0 0.0 0.0 0.1300924852898296 0.0 35 0.0 0.0 0.0 0.17644727889884934 0.0 36 0.0 0.0 0.0 0.2639232603868382 0.0 37 0.0 0.0 0.0 0.4194361163654851 0.0 38 0.0 0.0 0.0 0.6085935806087431 0.0 39 0.0 0.0 0.0 0.8613019715740443 0.0 40 0.0 0.0 0.0 1.1566268663411863 0.0 41 0.0 0.0 0.0 1.452699419069764 0.0 42 0.0 0.0 0.0 1.801108029098848 0.0 43 0.0 0.0 0.0 2.2452168581917142 0.0 44 0.0 0.0 0.0 2.757362561775239 0.0 45 0.0 0.0 0.0 3.359974878692496 0.0 46 0.0 0.0 0.0 4.0238951484474885 0.0 47 0.0 0.0 0.0 4.725198316274271 0.0 48 0.0 0.0 0.0 5.393604533797878 0.0 49 0.0 0.0 0.0 6.085935806087432 0.0 50 0.0 0.0 0.0 6.678828569506022 0.0 51 0.0 0.0 0.0 7.229852487084209 0.0 52 0.0 0.0 0.0 7.798820195736854 0.0 53 0.0 0.0 0.0 8.38573169546396 0.0 54 0.0 0.0 0.0 9.00703546141711 0.0 55 0.0 0.0 0.0 9.65525491398195 0.0 56 0.0 0.0 0.0 10.33936194869571 0.0 57 0.0 0.0 0.0 10.997300954759217 0.0 58 0.0 0.0 0.0 11.67542672578149 0.0 59 0.0 0.0 0.0 12.274300752891568 0.0 60 0.0 0.0 0.0 12.89186622903754 0.0 61 0.0 0.0 0.0 13.504945757414898 0.0 62 0.0 0.0 0.0 14.129987813175228 0.0 63 0.0 0.0 0.0 14.706432101442232 0.0 64 0.0 0.0 0.0 15.359885159737123 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCATAG 15 0.0022205971 70.0 3 CGTTGGT 20 0.00693868 52.500004 14 TTAGCCA 30 5.860687E-4 46.666664 4 GTAATTG 30 5.860687E-4 46.666664 8 CGATTAG 45 9.1583584E-5 38.88889 52 TTGCGAT 45 9.1583584E-5 38.88889 49 TTCGGTA 45 9.1583584E-5 38.88889 26 GTAAGCA 45 9.1583584E-5 38.88889 30 CGGTAAG 45 9.1583584E-5 38.88889 28 TCGTTCG 50 1.7024306E-4 35.0 23 GTTCGGT 50 1.7024306E-4 35.0 25 TCGGTAA 65 2.0902364E-5 32.307693 27 ATGCCAT 55 2.9794333E-4 31.81818 43 TCTCCAA 45 0.0042949934 31.111113 65 CTACACG 45 0.0042949934 31.111113 4 CCGCAGT 45 0.0042949934 31.111113 1 CAGTACT 70 3.468073E-5 30.0 4 GGTAAGC 60 4.961061E-4 29.166666 29 CGTTCGG 60 4.961061E-4 29.166666 24 TGTATAT 75 5.5517718E-5 28.0 3 >>END_MODULE