##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781184_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 95166 Sequences flagged as poor quality 0 Sequence length 76 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33214593447239 34.0 34.0 34.0 31.0 34.0 2 32.36859802870773 34.0 34.0 34.0 31.0 34.0 3 32.326335035621966 34.0 34.0 34.0 31.0 34.0 4 32.45408023874073 34.0 34.0 34.0 31.0 34.0 5 32.492066494336214 34.0 34.0 34.0 31.0 34.0 6 35.56241724985814 38.0 37.0 38.0 31.0 38.0 7 35.500168127272346 38.0 37.0 38.0 31.0 38.0 8 35.34468192421663 38.0 36.0 38.0 30.0 38.0 9 35.67626042914486 38.0 37.0 38.0 31.0 38.0 10-11 35.58627030662211 38.0 37.0 38.0 31.0 38.0 12-13 35.53804404934536 38.0 37.0 38.0 31.0 38.0 14-15 35.49078977786184 38.0 37.0 38.0 31.0 38.0 16-17 35.47308912847025 38.0 36.5 38.0 31.0 38.0 18-19 35.49546581762394 38.0 37.0 38.0 31.0 38.0 20-21 35.447449719437614 38.0 36.5 38.0 31.0 38.0 22-23 35.4877267091188 38.0 37.0 38.0 31.0 38.0 24-25 35.48978626820503 38.0 37.0 38.0 31.0 38.0 26-27 35.419608893932704 38.0 37.0 38.0 31.0 38.0 28-29 35.5154887249648 38.0 37.0 38.0 31.0 38.0 30-31 35.60240001681272 38.0 37.0 38.0 31.0 38.0 32-33 35.53781287434588 38.0 37.0 38.0 31.0 38.0 34-35 35.528534350503335 38.0 37.0 38.0 31.0 38.0 36-37 35.448290355799344 38.0 37.0 38.0 31.0 38.0 38-39 35.47479141710275 38.0 37.0 38.0 31.0 38.0 40-41 35.4647090347393 38.0 36.5 38.0 31.0 38.0 42-43 35.54359750331001 38.0 37.0 38.0 31.0 38.0 44-45 35.54560452262362 38.0 37.0 38.0 31.0 38.0 46-47 35.515215518147244 38.0 37.0 38.0 31.0 38.0 48-49 35.48794737616376 38.0 37.0 38.0 31.0 38.0 50-51 35.36867683836664 38.0 36.5 38.0 30.5 38.0 52-53 35.44971418363701 38.0 36.5 38.0 31.0 38.0 54-55 35.42384359960491 38.0 36.0 38.0 31.0 38.0 56-57 35.35615661055419 38.0 36.0 38.0 29.5 38.0 58-59 35.351039236702185 38.0 36.0 38.0 30.0 38.0 60-61 35.35174326965513 38.0 36.0 38.0 29.5 38.0 62-63 35.336716894689275 38.0 36.0 38.0 29.0 38.0 64-65 35.3528728747662 38.0 36.0 38.0 30.0 38.0 66-67 35.24941680852405 38.0 36.0 38.0 27.0 38.0 68-69 34.96081058361179 38.0 36.0 38.0 27.0 38.0 70-71 35.169115020070194 38.0 36.0 38.0 27.0 38.0 72-73 35.18958451547822 38.0 36.0 38.0 27.0 38.0 74-75 35.185418111510415 38.0 36.0 38.0 27.0 38.0 76 34.04703360443856 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 14.0 14 49.0 15 122.0 16 281.0 17 384.0 18 489.0 19 486.0 20 454.0 21 423.0 22 425.0 23 454.0 24 559.0 25 625.0 26 760.0 27 921.0 28 1078.0 29 1336.0 30 1753.0 31 2243.0 32 2784.0 33 3912.0 34 5537.0 35 8435.0 36 15827.0 37 45813.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.96914864552466 19.097156547506465 9.125107706533846 25.808587100435034 2 22.769686652796167 19.648824159889035 32.613538448605595 24.967950738709202 3 19.157051888279426 22.23378097219595 29.51053947838514 29.09862766113948 4 13.293613265241788 16.276821553916314 37.67627093709938 32.753294243742516 5 13.25368303805981 34.259084126683895 36.58239287140365 15.904839963852638 6 29.770085955067987 37.93476661833007 17.960195868272283 14.334951558329657 7 28.439778912636864 29.60300947817498 22.847445516255803 19.10976609293235 8 25.33362755605994 34.41565264905533 19.717125864279257 20.533593930605466 9 24.519261080638046 14.790996784565916 21.210306201794758 39.479435933001284 10-11 24.64771712289182 24.63248042872905 28.428518888246728 22.291283560132403 12-13 24.634848580375344 23.070739549839228 27.075846415736716 25.218565454048715 14-15 23.048672845343926 24.126788979257295 24.465670512578022 28.358867662820753 16-17 23.069163356660994 27.22295777903873 25.751844146018538 23.95603471828174 18-19 22.50646239203077 27.127860790618495 26.835739654918772 23.52993716243196 20-21 22.499632221591746 27.561839312359453 26.579345564592394 23.359182901456403 22-23 22.878969379820525 26.515772439736878 26.98915579093374 23.616102389508857 24-25 22.472311539835655 26.9802240295904 26.85307777987937 23.694386650694575 26-27 21.78561671185087 27.004917722716097 27.32751192652838 23.88195363890465 28-29 22.40453523317151 27.15518147237459 27.705798289305005 22.734485005148898 30-31 22.700859550679866 27.096336927053784 27.05325431351533 23.149549208751026 32-33 22.027825063573125 27.309123006115634 27.147300506483408 23.515751423827837 34-35 23.005590231805474 26.761133177815605 27.212449824517158 23.020826765861756 36-37 22.978269550049387 26.687052098438517 26.674967950738708 23.659710400773385 38-39 22.317844608368535 27.22085618813442 27.348002437845448 23.113296765651597 40-41 22.53693546014333 26.301935565222873 27.845554084441922 23.315574890191876 42-43 22.26530483576067 26.80579198453229 27.419456528592146 23.509446651114892 44-45 22.025198074942733 26.650799655339092 27.421032721770377 23.902969547947798 46-47 21.96057415463506 26.440640564907635 27.698442721139905 23.9003425593174 48-49 21.63114978038375 26.637139314461045 28.104049765672613 23.62766113948259 50-51 21.942185234222304 26.449046928524893 27.786709539121112 23.822058298131683 52-53 21.991572620473697 26.063404997583174 28.117184708824578 23.82783767311855 54-55 21.234999894920456 26.571464598701215 28.2422293676313 23.95130613874703 56-57 21.285963474350083 26.642918689447914 28.03574806128239 24.035369774919616 58-59 21.397873190004834 26.32295147426602 27.893890675241156 24.385284660487986 60-61 21.232372906290063 26.165332156442428 28.008952777252382 24.59334216001513 62-63 20.737448248323982 26.07076056574827 28.722442889267175 24.469348296660574 64-65 21.57230523506294 26.208414769980877 27.926990731984112 24.29228926297207 66-67 21.365298530987957 25.88214278208604 27.821385789042306 24.931172897883698 68-69 21.04638211125822 26.412269087699386 27.46411533530883 25.077233465733563 70-71 22.015215518147237 25.886871361620745 27.393186642288214 24.704726477943804 72-73 21.82817392766324 25.411386419519577 27.32593573335015 25.434503919467037 74-75 21.819767564045982 25.872160225290546 27.10106550658849 25.207006704074985 76 22.517495744278417 24.980560284135088 27.06744005211946 25.434503919467037 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 2.0 11 3.0 12 3.0 13 2.5 14 5.5 15 15.5 16 27.5 17 33.0 18 49.0 19 71.5 20 96.0 21 114.0 22 139.0 23 214.0 24 317.0 25 370.0 26 437.5 27 566.5 28 753.0 29 878.0 30 1015.0 31 1244.0 32 1597.5 33 1859.0 34 2087.0 35 2512.5 36 3046.0 37 3382.0 38 3614.5 39 4296.5 40 5118.0 41 5526.0 42 5562.0 43 5682.0 44 5796.5 45 5752.5 46 5714.0 47 5689.5 48 5265.5 49 4722.5 50 4579.0 51 4274.0 52 3549.5 53 2915.0 54 2700.0 55 2553.5 56 2268.5 57 1945.5 58 1761.0 59 1543.0 60 1197.5 61 1004.0 62 938.0 63 866.5 64 754.0 65 728.5 66 707.0 67 670.0 68 666.0 69 648.5 70 591.5 71 548.0 72 566.0 73 532.0 74 459.0 75 438.0 76 399.0 77 331.5 78 264.5 79 226.0 80 215.5 81 175.5 82 117.0 83 88.0 84 77.0 85 54.5 86 34.0 87 25.0 88 19.5 89 13.5 90 11.0 91 6.5 92 4.0 93 4.5 94 2.5 95 0.5 96 1.0 97 0.5 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.001050795452157283 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 95166.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.022466006767125 #Duplication Level Percentage of deduplicated Percentage of total 1 73.05495153503114 41.65773490532333 2 14.605830538458703 16.65720950759725 3 4.724873769948034 8.082718617993821 4 2.1800022113293775 4.972364079608264 5 1.2088600597058932 3.4466090830758884 6 0.895588397891866 3.0641195384906372 7 0.665241587734493 2.6553601076014544 8 0.4883352375336306 2.22768635857344 9 0.4109387093207534 2.1089464724796674 >10 1.7635351785648474 15.063152806674655 >50 0.0018427744812589838 0.06409852258159428 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0010507954521572832 0.0 10 0.0 0.0 0.0 0.0010507954521572832 0.0 11 0.0 0.0 0.0 0.0010507954521572832 0.0 12 0.0 0.0 0.0 0.0010507954521572832 0.0 13 0.0 0.0 0.0 0.0010507954521572832 0.0 14 0.0 0.0 0.0 0.0010507954521572832 0.0 15 0.0 0.0 0.0 0.0010507954521572832 0.0 16 0.0 0.0 0.0 0.0010507954521572832 0.0 17 0.0 0.0 0.0 0.0010507954521572832 0.0 18 0.0 0.0 0.0 0.0010507954521572832 0.0 19 0.0 0.0 0.0 0.0021015909043145663 0.0 20 0.0 0.0 0.0 0.0021015909043145663 0.0 21 0.0 0.0 0.0 0.0021015909043145663 0.0 22 0.0 0.0 0.0 0.007355568165100981 0.0 23 0.0 0.0 0.0 0.007355568165100981 0.0 24 0.0 0.0 0.0 0.009457159069415548 0.0 25 0.0 0.0021015909043145663 0.0 0.009457159069415548 0.0 26 0.0 0.0021015909043145663 0.0 0.009457159069415548 0.0 27 0.0 0.0021015909043145663 0.0 0.012609545425887396 0.0 28 0.0 0.0021015909043145663 0.0 0.01786352268667381 0.0 29 0.0 0.0021015909043145663 0.0 0.024168295399617512 0.0 30 0.0 0.0021015909043145663 0.0 0.02837147720824664 0.0 31 0.0 0.0021015909043145663 0.0 0.03572704537334762 0.0 32 0.0 0.0021015909043145663 0.0 0.04413340899060589 0.0 33 0.0 0.0021015909043145663 0.0 0.0683017043902234 0.0 34 0.0 0.0021015909043145663 0.0 0.09667318159847005 0.0 35 0.0 0.0021015909043145663 0.0 0.13765420423260408 0.0 36 0.0 0.0021015909043145663 0.0 0.20805749952714206 0.0 37 0.0 0.0021015909043145663 0.0 0.30683227202992663 0.0 38 0.0 0.0021015909043145663 0.0 0.44028329445390163 0.0 39 0.0 0.0021015909043145663 0.0 0.5632263623563037 0.0 40 0.0 0.0021015909043145663 0.0 0.760775907361873 0.0 41 0.0 0.0021015909043145663 0.0 0.9488682932980266 0.0 42 0.0 0.0021015909043145663 0.0 1.2000084063636172 0.0 43 0.0 0.0021015909043145663 0.0 1.4784692011852973 0.0 44 0.0 0.0021015909043145663 0.0 1.7958094277367969 0.0 45 0.0 0.0021015909043145663 0.0 2.212975222243238 0.0 46 0.0 0.0021015909043145663 0.0 2.6816299939053865 0.0 47 0.0 0.0021015909043145663 0.0 3.1734022655149947 0.0 48 0.0 0.0021015909043145663 0.0 3.663072946220289 0.0 49 0.0 0.0021015909043145663 0.0 4.064476808944371 0.0 50 0.0 0.0021015909043145663 0.0 4.469033058024925 0.0 51 0.0 0.0021015909043145663 0.0 4.903011579765883 0.0 52 0.0 0.0021015909043145663 0.0 5.297059874324864 0.0 53 0.0 0.0021015909043145663 0.0 5.662736691675598 0.0 54 0.0 0.0021015909043145663 0.0 6.120883508816174 0.0 55 0.0 0.0021015909043145663 0.0 6.62526532585167 0.0 56 0.0 0.0021015909043145663 0.0 7.085513733896559 0.0 57 0.0 0.0021015909043145663 0.0 7.604606687262257 0.0 58 0.0 0.0021015909043145663 0.0 8.094277367967551 0.0 59 0.0 0.0021015909043145663 0.0 8.606014753168148 0.0 60 0.0 0.0021015909043145663 0.0 9.13876804741189 0.0 61 0.0 0.0021015909043145663 0.0 9.569594182796378 0.0 62 0.0 0.0021015909043145663 0.0 10.056112477145199 0.0 63 0.0 0.0021015909043145663 0.0 10.515310089737932 0.0 64 0.0 0.0021015909043145663 0.0 10.977660088687136 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCTT 15 0.0022186209 70.0 65 GCTGCGT 15 0.0022186209 70.0 61 CTAAGCG 15 0.0022186209 70.0 40 GCGTTTT 15 0.0022186209 70.0 44 AGCGTTT 20 0.006932554 52.5 43 CGTGGGG 20 0.006932554 52.5 22 ACATTCA 20 0.006932554 52.5 16 ATCACGG 20 0.006932554 52.5 16 CCGAATG 20 0.006932554 52.5 9 TTGCCGA 20 0.006932554 52.5 16 GCGTGCT 20 0.006932554 52.5 64 CGTTTTG 20 0.006932554 52.5 45 CGTTTGG 20 0.006932554 52.5 28 ATTCGCC 30 5.852107E-4 46.666664 25 AGCCCGA 40 0.0024083357 35.0 6 TCCTGCG 40 0.0024083357 35.0 69 TTGTATA 40 0.0024083357 35.0 2 ACACTAT 40 0.0024083357 35.0 6 TTCGCCT 40 0.0024083357 35.0 26 TAACACT 65 2.0839321E-5 32.307693 4 >>END_MODULE