SRR1781183_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781183_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	206113
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTTC	25	2.3864204E-4	55.999996	48
CGTAGTG	20	0.0069439844	52.5	44
CGTATGC	45	1.6790163E-6	46.666664	41
TATGCCG	45	1.6790163E-6	46.666664	43
ATGCCGT	45	1.6790163E-6	46.666664	44
CCGTCTT	40	4.5816276E-5	43.75	47
TGCCGTC	55	6.6725024E-6	38.181816	45
AGCGTCA	40	0.0024148447	35.0	3
ACCAGTT	40	0.0024148447	35.0	37
TCGTATG	40	0.0024148447	35.0	40
GCCGTCT	50	1.705627E-4	35.0	46
GTATGCC	75	1.4839807E-6	32.666668	42
CTCGTAT	45	0.004300342	31.111109	39
GTTATAC	45	0.004300342	31.111109	3
CCATTAG	45	0.004300342	31.111109	14
GTACTGA	65	7.9370703E-4	26.923079	1
GTGTAGG	80	0.0026597984	21.875	1
GAGTGTT	85	0.0037803734	20.588236	68
CTTACAC	120	5.6885794E-5	20.416668	3
TATTGGG	90	0.0052624755	19.444443	2